CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.342610
(
Cucumis sativus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Cucsa.342610
T257295_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.342610.1
MADS box
22
69
KLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFCF
Links
Other
MADS box
family TFs
Other
Cucumis sativus
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_05183
Aegilops tauschii
F775_05183
N
0.000
BRADI2G14550
Brachypodium distachyon
BRADI2G14550
N
0.000
BRADI2G14567
Brachypodium distachyon
BRADI2G14567
N
0.000
MLOC_12452
Hordeum vulgare
MLOC_12452
N
0.000
LPERR05G23430
Leersia perrieri
LPERR05G23430
N
0.000
OBART05G27740
Oryza barthii
OBART05G27740
N
0.000
OB05G35290
Oryza brachyantha
OB05G35290
N
0.000
ORGLA05G0241100
Oryza glaberrima
ORGLA05G0241100
N
0.000
OGLUM05G29230
Oryza glumaepatula
OGLUM05G29230
N
0.000
BGIOSGA020470
Oryza indica
BGIOSGA020470
N
0.000
OLONG_010405
Oryza longistaminata
OLONG_010405
N
0.000
OMERI05G23660
Oryza meridionalis
OMERI05G23660
N
0.000
ONIVA05G29730
Oryza nivara
ONIVA05G29730
N
0.000
OPUNC05G25360
Oryza punctata
OPUNC05G25360
N
0.000
ORUFI05G29710
Oryza rufipogon
ORUFI05G29710
N
0.000
OS05G0589200
Oryza sativa
OS05G0589200
N
0.000
Pavir.J02804
Panicum virgatum
Pavir.J02804
N
0.000
Pavir.J05536
Panicum virgatum
Pavir.J05536
N
0.000
Sb09g030380
Sorghum bicolor
Sb09g030380
N
0.000
Sb09g030350
Sorghum bicolor
Sb09g030350
N
0.000
Traes_1BL_3E662FC82
Triticum aestivum
Traes_1BL_3E662FC82
N
0.000
Traes_1DL_F23E9DAA9
Triticum aestivum
Traes_1DL_F23E9DAA9
N
0.000
Traes_1AL_2F1278623
Triticum aestivum
Traes_1AL_2F1278623
N
0.000
TRIUR3_15558
Triticum urartu
TRIUR3_15558
N
0.000
GRMZM5G830932
Zea mays
GRMZM5G830932
N
0.000