mgf000046m (Mimulus guttatus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 mgf000046m T257379_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q40513_TOBAC
M11001_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DEF_01 		0.872 0.872
AP3
M08146_2.00 		Arabidopsis thaliana
WDCCMAAARWRGHAA
TTDCYWYTTTKGGHW		 ChIP-seq
Mathelier et al.(2014)
MA0556.1 		0.830 0.830
AP3
M10919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSB_Q2 		0.830 0.830
Q8VWZ4_MALDO
M11026_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS13_01 		0.766 0.766
MADS16
M10971_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS16_01 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf000046m MADS box 10 56

Links

Other MADS box family TFs
Other Mimulus guttatus TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc04g081000.2 Solanum lycopersicum Solyc04g081000.2 I 0.915
PGSC0003DMG400003709 Solanum tuberosum PGSC0003DMG400003709 I 0.915
mgf015533m Mimulus guttatus mgf015533m I 0.915
Q40513_TOBAC Nicotiana tabacum Q40513_TOBAC D 0.872
Eucgr.F01615 Eucalyptus grandis Eucgr.F01615 I 0.833
MTR_3g113030 Medicago truncatula MTR_3g113030 I 0.830
Bo8g083600 Brassica oleracea Bo8g083600 I 0.830
Cla021117 Citrullus lanatus Cla021117 I 0.830
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I 0.830
Lus10033187.g Linum usitatissimum Lus10033187.g I 0.830
AP3 Arabidopsis thaliana AT3G54340 D 0.830
AP3 Populus trichocarpa POPTR_0002s02990 I 0.830
Lus10010630.g Linum usitatissimum Lus10010630.g I 0.830
Lus10031960.g Linum usitatissimum Lus10031960.g I 0.830
Bo4g120010 Brassica oleracea Bo4g120010 I 0.830
Ca_04909 Cicer arietinum Ca_04909 I 0.830
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I 0.830
GLYMA04G02980 Glycine max GLYMA04G02980 I 0.830
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I 0.830
Bra014822 Brassica rapa Bra014822 I 0.830
Bra007067 Brassica rapa Bra007067 I 0.830
Cucsa.342790 Cucumis sativus Cucsa.342790 I 0.830
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I 0.830
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I 0.830
Carubv10018833m.g Capsella rubella Carubv10018833m.g I 0.830
GLYMA06G02990 Glycine max GLYMA06G02990 I 0.830
AP3 Vitis vinifera VIT_18s0001g13460 I 0.809
Gorai.003G011500 Gossypium raimondii Gorai.003G011500 I 0.792
TCM_034148 Theobroma cacao TCM_034148 I 0.787
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I 0.787
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I 0.787
Gorai.009G271100 Gossypium raimondii Gorai.009G271100 I 0.787
SapurV1A.2002s0050 Salix purpurea SapurV1A.2002s0050 I 0.787
Eucgr.I02376 Eucalyptus grandis Eucgr.I02376 I 0.771
Pm006266 Prunus mume Pm006266 I 0.766
Q8VWZ4_MALDO Malus domestica Q8VWZ4_MALDO D 0.766
MTR_5g021270 Medicago truncatula MTR_5g021270 I 0.766
SapurV1A.0569s0080 Salix purpurea SapurV1A.0569s0080 I 0.766
29782.m000119 Ricinus communis 29782.m000119 I 0.766
GLYMA01G37470 Glycine max GLYMA01G37470 I 0.766
GLYMA11G07820 Glycine max GLYMA11G07820 I 0.766
chr2.CM0249.370.nd Lotus japonicus chr2.CM0249.370.nd I 0.766
Ca_01994 Cicer arietinum Ca_01994 I 0.766
MDP0000133037 Malus domestica MDP0000133037 I 0.766
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I 0.766
POPTR_0007s13660 Populus trichocarpa POPTR_0007s13660 I 0.766
POPTR_0005s12000 Populus trichocarpa POPTR_0005s12000 I 0.766
gene14896-v1.0-hybrid Fragaria vesca gene14896-v1.0-hybrid I 0.766
MDP0000184294 Malus domestica MDP0000184294 I 0.766
MDP0000224779 Malus domestica MDP0000224779 I 0.766
MDP0000315938 Malus domestica MDP0000315938 I 0.766
cassava41235.m1 Manihot esculenta cassava41235.m1 I 0.750
PGSC0003DMG400003541 Solanum tuberosum PGSC0003DMG400003541 I 0.750
TCM_000266 Theobroma cacao TCM_000266 I 0.750
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I 0.750
orange1.1g040046m.g Citrus sinensis orange1.1g040046m.g I 0.750
Ciclev10002410m.g Citrus clementina Ciclev10002410m.g I 0.750
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I 0.750
Solyc02g084630.2 Solanum lycopersicum Solyc02g084630.2 I 0.750
Ciclev10026433m.g Citrus clementina Ciclev10026433m.g I 0.745
Ciclev10009338m.g Citrus clementina Ciclev10009338m.g I 0.745
SapurV1A.0396s0210 Salix purpurea SapurV1A.0396s0210 I 0.745
orange1.1g024093m.g Citrus sinensis orange1.1g024093m.g I 0.745
Pm026712 Prunus mume Pm026712 I 0.745
cassava21176.m1 Manihot esculenta cassava21176.m1 I 0.745
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I 0.729
PRUPE_ppa026083mg Prunus persica PRUPE_ppa026083mg I 0.729
orange1.1g027470m.g Citrus sinensis orange1.1g027470m.g I 0.729
cassava33649.m1 Manihot esculenta cassava33649.m1 I 0.729
SapurV1A.0025s0830 Salix purpurea SapurV1A.0025s0830 I 0.729
MDP0000179718 Malus domestica MDP0000179718 I 0.727
GSMUA_Achr9G20940_001 Musa acuminata GSMUA_Achr9G20940_001 I 0.723
GSMUA_Achr9G20950_001 Musa acuminata GSMUA_Achr9G20950_001 I 0.723
PRUPE_ppa010727mg Prunus persica PRUPE_ppa010727mg I 0.708
OB06G35020 Oryza brachyantha OB06G35020 I 0.702
LjT38P01.180.nd Lotus japonicus LjT38P01.180.nd I 0.702
OGLUM06G28660 Oryza glumaepatula OGLUM06G28660 I 0.702
OLONG_004226 Oryza longistaminata OLONG_004226 I 0.702
OBART06G27230 Oryza barthii OBART06G27230 I 0.702
Pavir.Db00185 Panicum virgatum Pavir.Db00185 I 0.702
GLYMA04G10015 Glycine max GLYMA04G10015 I 0.702
GLYMA06G10020 Glycine max GLYMA06G10020 I 0.702
OMERI06G27290 Oryza meridionalis OMERI06G27290 I 0.702
LPERR06G22780 Leersia perrieri LPERR06G22780 I 0.702
GRMZM2G139073 Zea mays GRMZM2G139073 I 0.702
Pavir.J11672 Panicum virgatum Pavir.J11672 I 0.702
BGIOSGA020546 Oryza indica BGIOSGA020546 I 0.702
ORUFI06G29170 Oryza rufipogon ORUFI06G29170 I 0.702
e_gw1.55.13.1 Physcomitrella patens e_gw1.55.13.1 I 0.702
SVP Arabidopsis thaliana AT2G22540 D 0.702
TT16 Vitis vinifera VIT_01s0011g01560 I 0.702
estExt_Genewise1.C_80073 Physcomitrella patens estExt_Genewise1.C_80073 I 0.702
estExt_gwp_gw1.C_1630046 Physcomitrella patens estExt_gwp_gw1.C_1630046 I 0.702
estExt_gwp_gw1.C_900087 Physcomitrella patens estExt_gwp_gw1.C_900087 I 0.702
Aquca_006_00072 Aquilegia coerulea Aquca_006_00072 I 0.702
evm.TU.supercontig_21.11 Carica papaya evm.TU.supercontig_21.11 I 0.702
Solyc11g010570.1 Solanum lycopersicum Solyc11g010570.1 I 0.702
fgenesh1_pg.scaffold_118000119 Physcomitrella patens fgenesh1_pg.scaffold_118000119 I 0.702
ORGLA06G0229200 Oryza glaberrima ORGLA06G0229200 I 0.702
MADS16 Oryza sativa OS06G0712700 D 0.702
PGSC0003DMG400016203 Solanum tuberosum PGSC0003DMG400016203 I 0.702
Si007221m.g Setaria italica Si007221m.g I 0.702
Sb10g029810 Sorghum bicolor Sb10g029810 I 0.702
ONIVA06G29820 Oryza nivara ONIVA06G29820 I 0.702