mgf004425m (Mimulus guttatus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 mgf004425m T257389_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf004425m MADS box 10 57

Links

Other MADS box family TFs
Other Mimulus guttatus TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.729
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.771
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.729
AGL65 Arabidopsis thaliana AT1G18750 D 0.729
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.729
Bo8g068060 Brassica oleracea Bo8g068060 I 0.750
Bo8g104060 Brassica oleracea Bo8g104060 I 0.750
Bra016544 Brassica rapa Bra016544 I 0.750
Bra025685 Brassica rapa Bra025685 I 0.729
Bra031049 Brassica rapa Bra031049 I 0.750
PK21701.1 Cannabis sativa PK21701.1 I 0.750
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.729
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.729
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.750
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.750
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.729
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.750
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.771
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.708
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.708
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.792
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.792
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.708
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.750
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.729
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.717
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.708
MDP0000146231 Malus domestica MDP0000146231 I 0.708
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.750
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.750
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.708
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.708
mgf000945m Mimulus guttatus mgf000945m I 1.000
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.708
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.708
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.708
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.750
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.792
30138.m004061 Ricinus communis 30138.m004061 I 0.771
29813.m001508 Ricinus communis 29813.m001508 I 0.739
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I 0.833
PGSC0003DMG400019525 Solanum tuberosum PGSC0003DMG400019525 N 0.792
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.750
TCM_014051 Theobroma cacao TCM_014051 I 0.792
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.771