CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf006158m
(
Mimulus guttatus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
mgf006158m
T257396_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FBP1_PETHY
M10996_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP1_01
0.958
0.958
MADS2_PETHY
M10998_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_01
0.854
0.854
Q9AVU7_MALDO
M11027_2.00
Malus domestica
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PI_01
0.833
0.833
MADS16
M10971_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS16_01
0.729
0.729
AGL6
M06986_2.00
Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA
Dap-seq
OMalley et al.(2016)
AGL6_col_a
0.708
0.708
AP3
M08146_2.00
Arabidopsis thaliana
WDCCMAAARWRGHAA
TTDCYWYTTTKGGHW
ChIP-seq
Mathelier et al.(2014)
MA0556.1
0.708
0.708
PI
M08148_2.00
Arabidopsis thaliana
MCMAAARWRGAAAR
YTTTCYWYTTTKGK
ChIP-seq
Mathelier et al.(2014)
MA0559.1
0.708
0.708
Q40513_TOBAC
M11001_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DEF_01
0.708
0.708
O82699_MALDO
M11022_2.00
Malus domestica
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_01
0.708
0.708
MAD17_ORYSJ
M10961_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS17_01
0.708
0.708
MADS2
M10966_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_02
0.708
0.708
MADS6
M10967_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS6_01
0.708
0.708
AP3
M10919_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSB_Q2
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf006158m
MADS box
10
57
RIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEF
Links
Other
MADS box
family TFs
Other
Mimulus guttatus
TFs
222 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf003143m
Mimulus guttatus
mgf003143m
I
1.000
mgf008207m
Mimulus guttatus
mgf008207m
I
1.000
Solyc08g067230.2
Solanum lycopersicum
Solyc08g067230.2
I
0.958
PGSC0003DMG401007392
Solanum tuberosum
PGSC0003DMG401007392
I
0.958
FBP1_PETHY
Petunia x hybrida
FBP1_PETHY
D
0.958
PI
Vitis vinifera
VIT_18s0001g01760
I
0.917
Gorai.005G087600
Gossypium raimondii
Gorai.005G087600
I
0.917
TCM_035212
Theobroma cacao
TCM_035212
I
0.917
29648.m001978
Ricinus communis
29648.m001978
I
0.896
cassava33721.m1
Manihot esculenta
cassava33721.m1
I
0.896
evm.TU.supercontig_26.316
Carica papaya
evm.TU.supercontig_26.316
I
0.875
Gorai.002G223100
Gossypium raimondii
Gorai.002G223100
I
0.875
cassava32003.m1
Manihot esculenta
cassava32003.m1
I
0.875
Cucsa.018420
Cucumis sativus
Cucsa.018420
I
0.875
Eucgr.E01006
Eucalyptus grandis
Eucgr.E01006
I
0.875
Lus10029719.g
Linum usitatissimum
Lus10029719.g
I
0.875
Lus10042749.g
Linum usitatissimum
Lus10042749.g
I
0.875
Cla023547
Citrullus lanatus
Cla023547
I
0.875
Pm004718
Prunus mume
Pm004718
I
0.854
PRUPE_ppa012927mg
Prunus persica
PRUPE_ppa012927mg
I
0.854
GLYMA04G42420
Glycine max
GLYMA04G42420
I
0.854
GLYMA06G12380
Glycine max
GLYMA06G12380
I
0.854
MADS2_PETHY
Petunia x hybrida
MADS2_PETHY
D
0.854
SapurV1A.0829s0180
Salix purpurea
SapurV1A.0829s0180
I
0.854
POPTR_0002s07920
Populus trichocarpa
POPTR_0002s07920
I
0.833
Q9AVU7_MALDO
Malus domestica
Q9AVU7_MALDO
D
0.833
Ciclev10002471m.g
Citrus clementina
Ciclev10002471m.g
I
0.833
Ca_13111
Cicer arietinum
Ca_13111
I
0.833
Solyc06g059970.2
Solanum lycopersicum
Solyc06g059970.2
I
0.833
MTR_3g088615
Medicago truncatula
MTR_3g088615
I
0.833
GLYMA14G24590
Glycine max
GLYMA14G24590
I
0.833
LjSGA_047687.2
Lotus japonicus
LjSGA_047687.2
I
0.833
gene11268-v1.0-hybrid
Fragaria vesca
gene11268-v1.0-hybrid
I
0.833
GLYMA13G09660
Glycine max
GLYMA13G09660
I
0.833
Ca_03887
Cicer arietinum
Ca_03887
I
0.833
orange1.1g040096m.g
Citrus sinensis
orange1.1g040096m.g
I
0.833
gene11267-v1.0-hybrid
Fragaria vesca
gene11267-v1.0-hybrid
I
0.812
MTR_1g029670
Medicago truncatula
MTR_1g029670
I
0.812
POPTR_0005s20480
Populus trichocarpa
POPTR_0005s20480
I
0.812
orange1.1g042044m.g
Citrus sinensis
orange1.1g042044m.g
I
0.812
Ciclev10002422m.g
Citrus clementina
Ciclev10002422m.g
I
0.812
Traes_7BL_7F4124E70
Triticum aestivum
Traes_7BL_7F4124E70
I
0.800
GSMUA_Achr5G01230_001
Musa acuminata
GSMUA_Achr5G01230_001
I
0.771
GSMUA_Achr6G18670_001
Musa acuminata
GSMUA_Achr6G18670_001
I
0.771
Eucgr.E01007
Eucalyptus grandis
Eucgr.E01007
I
0.771
Gorai.008G064900
Gossypium raimondii
Gorai.008G064900
I
0.750
Si002929m.g
Setaria italica
Si002929m.g
I
0.750
TCM_000266
Theobroma cacao
TCM_000266
I
0.750
BRADI2G57000
Brachypodium distachyon
BRADI2G57000
I
0.750
Pavir.Ea03625
Panicum virgatum
Pavir.Ea03625
I
0.750
Pavir.J19259
Panicum virgatum
Pavir.J19259
I
0.750
BRADI1G35000
Brachypodium distachyon
BRADI1G35000
I
0.750
cassava33649.m1
Manihot esculenta
cassava33649.m1
I
0.750
Lus10033187.g
Linum usitatissimum
Lus10033187.g
I
0.750
AP3
Vitis vinifera
VIT_18s0001g13460
I
0.729
cassava21176.m1
Manihot esculenta
cassava21176.m1
I
0.729
TRIUR3_29719
Triticum urartu
TRIUR3_29719
I
0.729
ORGLA06G0229200
Oryza glaberrima
ORGLA06G0229200
I
0.729
MADS16
Oryza sativa
OS06G0712700
D
0.729
ONIVA06G29820
Oryza nivara
ONIVA06G29820
I
0.729
ORUFI06G29170
Oryza rufipogon
ORUFI06G29170
I
0.729
Pm018087
Prunus mume
Pm018087
I
0.729
cassava41235.m1
Manihot esculenta
cassava41235.m1
I
0.729
TRAES3BF021600020CFD_g
Triticum aestivum
TRAES3BF021600020CFD_g
I
0.729
Si007221m.g
Setaria italica
Si007221m.g
I
0.729
Sb03g041860
Sorghum bicolor
Sb03g041860
I
0.729
PRUPE_ppa019932mg
Prunus persica
PRUPE_ppa019932mg
I
0.729
cassava37822.valid.m1
Manihot esculenta
cassava37822.valid.m1
I
0.729
Sb10g029810
Sorghum bicolor
Sb10g029810
I
0.729
Traes_7DL_DDCC09B24
Triticum aestivum
Traes_7DL_DDCC09B24
I
0.729
Traes_7AL_1C76E543C
Triticum aestivum
Traes_7AL_1C76E543C
I
0.729
cassava37821.valid.m1
Manihot esculenta
cassava37821.valid.m1
I
0.729
TRIUR3_15782
Triticum urartu
TRIUR3_15782
I
0.729
OLONG_004226
Oryza longistaminata
OLONG_004226
I
0.729
LPERR06G22780
Leersia perrieri
LPERR06G22780
I
0.729
GRMZM2G139073
Zea mays
GRMZM2G139073
I
0.729
MLOC_31575
Hordeum vulgare
MLOC_31575
I
0.729
Lus10010630.g
Linum usitatissimum
Lus10010630.g
I
0.729
OB06G35020
Oryza brachyantha
OB06G35020
I
0.729
MLOC_59262
Hordeum vulgare
MLOC_59262
I
0.729
Pavir.Db00185
Panicum virgatum
Pavir.Db00185
I
0.729
Pavir.J11672
Panicum virgatum
Pavir.J11672
I
0.729
BGIOSGA020546
Oryza indica
BGIOSGA020546
I
0.729
Thhalv10010683m.g
Eutrema salsugineum
Thhalv10010683m.g
I
0.729
Bo4g120010
Brassica oleracea
Bo4g120010
I
0.729
Bo8g083600
Brassica oleracea
Bo8g083600
I
0.729
Bra014822
Brassica rapa
Bra014822
I
0.729
Bra007067
Brassica rapa
Bra007067
I
0.729
OBART06G27230
Oryza barthii
OBART06G27230
I
0.729
Lus10031960.g
Linum usitatissimum
Lus10031960.g
I
0.729
OGLUM06G28660
Oryza glumaepatula
OGLUM06G28660
I
0.729
OMERI06G27290
Oryza meridionalis
OMERI06G27290
I
0.729
OPUNC09G14150
Oryza punctata
OPUNC09G14150
I
0.727
gene26118-v1.0-hybrid
Fragaria vesca
gene26118-v1.0-hybrid
I
0.714
Carubv10023910m.g
Capsella rubella
Carubv10023910m.g
I
0.708
cassava3099.m1
Manihot esculenta
cassava3099.m1
I
0.708
Carubv10001962m.g
Capsella rubella
Carubv10001962m.g
I
0.708
Carubv10018833m.g
Capsella rubella
Carubv10018833m.g
I
0.708
SapurV1A.0168s0400
Salix purpurea
SapurV1A.0168s0400
I
0.708
Pavir.Ab02707
Panicum virgatum
Pavir.Ab02707
I
0.708
Cagra.0562s0025
Capsella grandiflora
Cagra.0562s0025
I
0.708
SapurV1A.0068s0650
Salix purpurea
SapurV1A.0068s0650
I
0.708
cassava28636.m1
Manihot esculenta
cassava28636.m1
I
0.708
SapurV1A.0228s0130
Salix purpurea
SapurV1A.0228s0130
I
0.708
evm.TU.supercontig_414.3
Carica papaya
evm.TU.supercontig_414.3
I
0.708
chr1.CM0195.210.nc
Lotus japonicus
chr1.CM0195.210.nc
I
0.708
chr2.CM0249.370.nd
Lotus japonicus
chr2.CM0249.370.nd
I
0.708
Q40513_TOBAC
Nicotiana tabacum
Q40513_TOBAC
D
0.708
PDK_20s1538871g001
Phoenix dactylifera
PDK_20s1538871g001
I
0.708
Thhalv10014683m.g
Eutrema salsugineum
Thhalv10014683m.g
I
0.708
29782.m000119
Ricinus communis
29782.m000119
I
0.708
SapurV1A.0578s0120
Salix purpurea
SapurV1A.0578s0120
I
0.708
evm.TU.contig_33612
Carica papaya
evm.TU.contig_33612
I
0.708
30174.m008934
Ricinus communis
30174.m008934
I
0.708
Pavir.Aa00924
Panicum virgatum
Pavir.Aa00924
I
0.708
Cagra.0179s0008
Capsella grandiflora
Cagra.0179s0008
I
0.708
Gorai.007G093700
Gossypium raimondii
Gorai.007G093700
I
0.708
Gorai.009G271100
Gossypium raimondii
Gorai.009G271100
I
0.708
Bostr.25993s0209
Boechera stricta
Bostr.25993s0209
I
0.708
mgf001713m
Mimulus guttatus
mgf001713m
I
0.708
Gorai.003G011500
Gossypium raimondii
Gorai.003G011500
I
0.708
Bostr.0697s0046
Boechera stricta
Bostr.0697s0046
I
0.708
evm.TU.supercontig_6.202
Carica papaya
evm.TU.supercontig_6.202
I
0.708
mgf007278m
Mimulus guttatus
mgf007278m
I
0.708
evm.TU.supercontig_6.199
Carica papaya
evm.TU.supercontig_6.199
I
0.708
gene19428-v1.0-hybrid
Fragaria vesca
gene19428-v1.0-hybrid
I
0.708
Bostr.26527s0175
Boechera stricta
Bostr.26527s0175
I
0.708
Cagra.0050s0135
Capsella grandiflora
Cagra.0050s0135
I
0.708
MDP0000574222
Malus domestica
MDP0000574222
I
0.708
O82699_MALDO
Malus domestica
O82699_MALDO
D
0.708
orange1.1g027470m.g
Citrus sinensis
orange1.1g027470m.g
I
0.708
Aquca_013_00477
Aquilegia coerulea
Aquca_013_00477
I
0.708
MDP0000149676
Malus domestica
MDP0000149676
I
0.708
Cucsa.115490
Cucumis sativus
Cucsa.115490
I
0.708
Cucsa.342790
Cucumis sativus
Cucsa.342790
I
0.708
Ciclev10021911m.g
Citrus clementina
Ciclev10021911m.g
I
0.708
MDP0000135652
Malus domestica
MDP0000135652
I
0.708
MDP0000144516
Malus domestica
MDP0000144516
I
0.708
orange1.1g037149m.g
Citrus sinensis
orange1.1g037149m.g
I
0.708
TCM_015044
Theobroma cacao
TCM_015044
I
0.708
GSMUA_Achr9G20950_001
Musa acuminata
GSMUA_Achr9G20950_001
I
0.708
LPERR01G34040
Leersia perrieri
LPERR01G34040
I
0.708
LPERR02G22830
Leersia perrieri
LPERR02G22830
I
0.708
LPERR04G18560
Leersia perrieri
LPERR04G18560
I
0.708
GSMUA_Achr9G20940_001
Musa acuminata
GSMUA_Achr9G20940_001
I
0.708
GSMUA_Achr4G30120_001
Musa acuminata
GSMUA_Achr4G30120_001
I
0.708
GRMZM2G160565
Zea mays
GRMZM2G160565
I
0.708
GSMUA_Achr1G00750_001
Musa acuminata
GSMUA_Achr1G00750_001
I
0.708
GSMUA_Achr2G10250_001
Musa acuminata
GSMUA_Achr2G10250_001
I
0.708
MAD17_ORYSJ
Oryza sativa
MAD17_ORYSJ
D
0.708
MLOC_52944
Hordeum vulgare
MLOC_52944
I
0.708
OB04G29660
Oryza brachyantha
OB04G29660
I
0.708
OBART01G39540
Oryza barthii
OBART01G39540
I
0.708
OBART02G28030
Oryza barthii
OBART02G28030
I
0.708
OB02G35340
Oryza brachyantha
OB02G35340
I
0.708
OB01G48280
Oryza brachyantha
OB01G48280
I
0.708
MTR_3g113030
Medicago truncatula
MTR_3g113030
I
0.708
MTR_5g021270
Medicago truncatula
MTR_5g021270
I
0.708
MTR_8g033270
Medicago truncatula
MTR_8g033270
I
0.708
GRMZM2G110153
Zea mays
GRMZM2G110153
I
0.708
GLYMA11G07820
Glycine max
GLYMA11G07820
I
0.708
BGIOSGA008820
Oryza indica
BGIOSGA008820
I
0.708
BGIOSGA016980
Oryza indica
BGIOSGA016980
I
0.708
Bo3g010390
Brassica oleracea
Bo3g010390
I
0.708
BRADI3G51800
Brachypodium distachyon
BRADI3G51800
I
0.708
BGIOSGA000377
Oryza indica
BGIOSGA000377
I
0.708
PI
Arabidopsis thaliana
AT5G20240
D
0.708
AMTR_s00001p00267050
Amborella trichopoda
AMTR_s00001p00267050
I
0.708
AGL6
Arabidopsis thaliana
AT2G45650
D
0.708
AP3
Arabidopsis thaliana
AT3G54340
D
0.708
F775_31247
Aegilops tauschii
F775_31247
I
0.708
AGL6
Arabidopsis lyrata
fgenesh2_kg.4__2761__AT2G45650.1
I
0.708
GLYMA03G02210
Glycine max
GLYMA03G02210
I
0.708
GLYMA06G02990
Glycine max
GLYMA06G02990
I
0.708
GLYMA07G08890
Glycine max
GLYMA07G08890
I
0.708
GLYMA03G02191
Glycine max
GLYMA03G02191
I
0.708
GLYMA02G33040
Glycine max
GLYMA02G33040
I
0.708
AP3
Arabidopsis lyrata
fgenesh2_kg.5__1825__AT3G54340.1
I
0.708
PI
Arabidopsis lyrata
fgenesh2_kg.6__2063__AT5G20240.1
I
0.708
GLYMA01G37470
Glycine max
GLYMA01G37470
I
0.708
OBART04G22790
Oryza barthii
OBART04G22790
I
0.708
OGLUM01G43760
Oryza glumaepatula
OGLUM01G43760
I
0.708
TCM_005458
Theobroma cacao
TCM_005458
I
0.708
AMTR_s00001p00217560
Amborella trichopoda
AMTR_s00001p00217560
I
0.708
Traes_6AL_1F7DAC5FA
Triticum aestivum
Traes_6AL_1F7DAC5FA
I
0.708
Traes_6BL_7C6B17284
Triticum aestivum
Traes_6BL_7C6B17284
I
0.708
Si018160m.g
Setaria italica
Si018160m.g
I
0.708
Sb04g031750
Sorghum bicolor
Sb04g031750
I
0.708
MADS6
Oryza sativa
OS02G0682200
D
0.708
OS04G0580700
Oryza sativa
OS04G0580700
I
0.708
PRUPE_ppa022942mg
Prunus persica
PRUPE_ppa022942mg
I
0.708
Traes_6DL_5B1D4DBF5
Triticum aestivum
Traes_6DL_5B1D4DBF5
I
0.708
TRIUR3_22246
Triticum urartu
TRIUR3_22246
I
0.708
Cla002388
Citrullus lanatus
Cla002388
I
0.708
Cla021117
Citrullus lanatus
Cla021117
I
0.708
Pm006266
Prunus mume
Pm006266
I
0.708
Ca_04909
Cicer arietinum
Ca_04909
I
0.708
Ca_01994
Cicer arietinum
Ca_01994
I
0.708
VIT_04s0023g02820
Vitis vinifera
VIT_04s0023g02820
I
0.708
VIT_15s0048g01270
Vitis vinifera
VIT_15s0048g01270
I
0.708
VIT_16s0022g02330
Vitis vinifera
VIT_16s0022g02330
I
0.708
MADS2
Oryza sativa
OS01G0883100
D
0.708
ORUFI05G05970
Oryza rufipogon
ORUFI05G05970
I
0.708
OMERI02G27210
Oryza meridionalis
OMERI02G27210
I
0.708
OMERI04G19060
Oryza meridionalis
OMERI04G19060
I
0.708
ONIVA01G44390
Oryza nivara
ONIVA01G44390
I
0.708
OMERI01G36400
Oryza meridionalis
OMERI01G36400
I
0.708
OLONG_003266
Oryza longistaminata
OLONG_003266
I
0.708
OGLUM02G28590
Oryza glumaepatula
OGLUM02G28590
I
0.708
OGLUM04G22680
Oryza glumaepatula
OGLUM04G22680
I
0.708
OLONG_003010
Oryza longistaminata
OLONG_003010
I
0.708
ONIVA02G31130
Oryza nivara
ONIVA02G31130
I
0.708
ONIVA04G21940
Oryza nivara
ONIVA04G21940
I
0.708
ORGLA04G0197900
Oryza glaberrima
ORGLA04G0197900
I
0.708
ORUFI02G29550
Oryza rufipogon
ORUFI02G29550
I
0.708
ORUFI04G24470
Oryza rufipogon
ORUFI04G24470
I
0.708
ORGLA02G0240800
Oryza glaberrima
ORGLA02G0240800
I
0.708
ORGLA01G0334300
Oryza glaberrima
ORGLA01G0334300
I
0.708
OPUNC01G38250
Oryza punctata
OPUNC01G38250
I
0.708
OPUNC02G25740
Oryza punctata
OPUNC02G25740
I
0.708
OPUNC04G20380
Oryza punctata
OPUNC04G20380
I
0.708
Pm026712
Prunus mume
Pm026712
I
0.702