mgf015533m (Mimulus guttatus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 mgf015533m T257413_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q40513_TOBAC
M11001_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DEF_01 		0.917 0.917
AP3
M08146_2.00 		Arabidopsis thaliana
WDCCMAAARWRGHAA
TTDCYWYTTTKGGHW		 ChIP-seq
Mathelier et al.(2014)
MA0556.1 		0.896 0.896
AP3
M10919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSB_Q2 		0.896 0.896
Q8VWZ4_MALDO
M11026_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS13_01 		0.812 0.812
MADS16
M10971_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS16_01 		0.750 0.750
Q9AVU7_MALDO
M11027_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PI_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf015533m MADS box 10 57

Links

Other MADS box family TFs
Other Mimulus guttatus TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Q40513_TOBAC Nicotiana tabacum Q40513_TOBAC D 0.917
mgf000046m Mimulus guttatus mgf000046m I 0.915
Carubv10018833m.g Capsella rubella Carubv10018833m.g I 0.896
Solyc04g081000.2 Solanum lycopersicum Solyc04g081000.2 I 0.896
Eucgr.F01615 Eucalyptus grandis Eucgr.F01615 I 0.896
MTR_3g113030 Medicago truncatula MTR_3g113030 I 0.896
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I 0.896
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I 0.896
Ca_04909 Cicer arietinum Ca_04909 I 0.896
Cucsa.342790 Cucumis sativus Cucsa.342790 I 0.896
GLYMA06G02990 Glycine max GLYMA06G02990 I 0.896
Cla021117 Citrullus lanatus Cla021117 I 0.896
PGSC0003DMG400003709 Solanum tuberosum PGSC0003DMG400003709 I 0.896
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I 0.896
AP3 Arabidopsis thaliana AT3G54340 D 0.896
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I 0.896
Lus10031960.g Linum usitatissimum Lus10031960.g I 0.875
Lus10033187.g Linum usitatissimum Lus10033187.g I 0.875
Lus10010630.g Linum usitatissimum Lus10010630.g I 0.875
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I 0.875
Bra007067 Brassica rapa Bra007067 I 0.875
Bra014822 Brassica rapa Bra014822 I 0.875
Bo8g083600 Brassica oleracea Bo8g083600 I 0.875
GLYMA04G02980 Glycine max GLYMA04G02980 I 0.875
Bo4g120010 Brassica oleracea Bo4g120010 I 0.875
AP3 Vitis vinifera VIT_18s0001g13460 I 0.875
Ciclev10009338m.g Citrus clementina Ciclev10009338m.g I 0.833
Eucgr.I02376 Eucalyptus grandis Eucgr.I02376 I 0.833
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I 0.833
Pm006266 Prunus mume Pm006266 I 0.833
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I 0.833
cassava41235.m1 Manihot esculenta cassava41235.m1 I 0.833
Ciclev10002410m.g Citrus clementina Ciclev10002410m.g I 0.833
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I 0.833
orange1.1g040046m.g Citrus sinensis orange1.1g040046m.g I 0.833
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I 0.833
orange1.1g024093m.g Citrus sinensis orange1.1g024093m.g I 0.833
MDP0000184294 Malus domestica MDP0000184294 I 0.812
MDP0000133037 Malus domestica MDP0000133037 I 0.812
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I 0.812
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I 0.812
MDP0000315938 Malus domestica MDP0000315938 I 0.812
Q8VWZ4_MALDO Malus domestica Q8VWZ4_MALDO D 0.812
orange1.1g027470m.g Citrus sinensis orange1.1g027470m.g I 0.812
TCM_034148 Theobroma cacao TCM_034148 I 0.812
MDP0000224779 Malus domestica MDP0000224779 I 0.812
Gorai.009G271100 Gossypium raimondii Gorai.009G271100 I 0.812
Ciclev10026433m.g Citrus clementina Ciclev10026433m.g I 0.812
SapurV1A.2002s0050 Salix purpurea SapurV1A.2002s0050 I 0.812
PRUPE_ppa026083mg Prunus persica PRUPE_ppa026083mg I 0.812
gene14896-v1.0-hybrid Fragaria vesca gene14896-v1.0-hybrid I 0.812
Gorai.003G011500 Gossypium raimondii Gorai.003G011500 I 0.812
POPTR_0005s12000 Populus trichocarpa POPTR_0005s12000 I 0.792
cassava21176.m1 Manihot esculenta cassava21176.m1 I 0.792
cassava33649.m1 Manihot esculenta cassava33649.m1 I 0.792
SapurV1A.0569s0080 Salix purpurea SapurV1A.0569s0080 I 0.792
PGSC0003DMG400003541 Solanum tuberosum PGSC0003DMG400003541 I 0.792
POPTR_0007s13660 Populus trichocarpa POPTR_0007s13660 I 0.792
Aquca_006_00072 Aquilegia coerulea Aquca_006_00072 I 0.792
AP3 Populus trichocarpa POPTR_0002s02990 I 0.792
Solyc02g084630.2 Solanum lycopersicum Solyc02g084630.2 I 0.792
Pm026712 Prunus mume Pm026712 I 0.787
SapurV1A.0396s0210 Salix purpurea SapurV1A.0396s0210 I 0.771
chr2.CM0249.370.nd Lotus japonicus chr2.CM0249.370.nd I 0.771
Ca_01994 Cicer arietinum Ca_01994 I 0.771
GLYMA11G07820 Glycine max GLYMA11G07820 I 0.771
MTR_5g021270 Medicago truncatula MTR_5g021270 I 0.771
GLYMA01G37470 Glycine max GLYMA01G37470 I 0.771
PRUPE_ppa010727mg Prunus persica PRUPE_ppa010727mg I 0.771
29782.m000119 Ricinus communis 29782.m000119 I 0.771
TCM_000266 Theobroma cacao TCM_000266 I 0.771
Traes_7BL_7F4124E70 Triticum aestivum Traes_7BL_7F4124E70 I 0.760
MLOC_31575 Hordeum vulgare MLOC_31575 I 0.750
OBART06G27230 Oryza barthii OBART06G27230 I 0.750
OLONG_004226 Oryza longistaminata OLONG_004226 I 0.750
OGLUM06G28660 Oryza glumaepatula OGLUM06G28660 I 0.750
LPERR06G22780 Leersia perrieri LPERR06G22780 I 0.750
OB06G35020 Oryza brachyantha OB06G35020 I 0.750
GSMUA_Achr9G20940_001 Musa acuminata GSMUA_Achr9G20940_001 I 0.750
GRMZM2G139073 Zea mays GRMZM2G139073 I 0.750
BRADI1G35000 Brachypodium distachyon BRADI1G35000 I 0.750
BGIOSGA020546 Oryza indica BGIOSGA020546 I 0.750
SapurV1A.0025s0830 Salix purpurea SapurV1A.0025s0830 I 0.750
OMERI06G27290 Oryza meridionalis OMERI06G27290 I 0.750
Pavir.Db00185 Panicum virgatum Pavir.Db00185 I 0.750
Pavir.J11672 Panicum virgatum Pavir.J11672 I 0.750
GSMUA_Achr9G20950_001 Musa acuminata GSMUA_Achr9G20950_001 I 0.750
ORGLA06G0229200 Oryza glaberrima ORGLA06G0229200 I 0.750
Traes_7AL_1C76E543C Triticum aestivum Traes_7AL_1C76E543C I 0.750
Sb10g029810 Sorghum bicolor Sb10g029810 I 0.750
ONIVA06G29820 Oryza nivara ONIVA06G29820 I 0.750
MADS16 Oryza sativa OS06G0712700 D 0.750
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I 0.750
Traes_7DL_DDCC09B24 Triticum aestivum Traes_7DL_DDCC09B24 I 0.750
ORUFI06G29170 Oryza rufipogon ORUFI06G29170 I 0.750
Si007221m.g Setaria italica Si007221m.g I 0.750
TRIUR3_29719 Triticum urartu TRIUR3_29719 I 0.750
gene26118-v1.0-hybrid Fragaria vesca gene26118-v1.0-hybrid I 0.743
AMTR_s00066p00109320 Amborella trichopoda AMTR_s00066p00109320 I 0.729
Aquca_007_00336 Aquilegia coerulea Aquca_007_00336 I 0.729
TT16 Vitis vinifera VIT_01s0011g01560 I 0.729
MDP0000179718 Malus domestica MDP0000179718 I 0.727
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I 0.708
Gorai.005G087600 Gossypium raimondii Gorai.005G087600 I 0.708
cassava33721.m1 Manihot esculenta cassava33721.m1 I 0.708
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I 0.708
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I 0.708
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I 0.708
Q9AVU7_MALDO Malus domestica Q9AVU7_MALDO D 0.708