mgf018870m (Mimulus guttatus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 mgf018870m T257425_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL15
M06992_2.00
Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN

NTTTCYWHWTTDGGWAANW
Dap-seq
OMalley et al.(2016)
AGL15_col_a
0.812 0.812
AGL15
M06993_2.00
Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH

DDNTTTCYHHWTTDGGWAANH
Dap-seq
OMalley et al.(2016)
AGL15_colamp_a
0.812 0.812
AGL15
M10927_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_01
0.812 0.812
AGL15
M10928_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_02
0.812 0.812
SVP
M06984_2.00
Arabidopsis thaliana
DDCCVAAWANGGHAA

TTDCCNTWTTBGGHH
Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b
0.792 0.792
SVP
M06985_2.00
Arabidopsis thaliana
CCMAAWANGGWAANW

WNTTWCCNTWTTKGG
Dap-seq
OMalley et al.(2016)
SVP_col_v3b
0.792 0.792
SVP
M08424_2.00
Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH

DDYTTTCCHTTTTKGGDWWN
ChIP-chip
Mathelier et al.(2014)
MA0555.1
0.792 0.792
Q9ATF2_PETHY
M11014_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP5_01
0.771 0.771
Q7X9I6_MALDO
M11023_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS12_02
0.771 0.771
squamosa
M02697_2.00
Antirrhinum majus
MYAWAWAWRGHAAN

NTTDCYWTWTWTRK
SELEX
Mathelier et al.(2014)
MA0082.1
0.750 0.750
SOC1
M08425_2.00
Arabidopsis thaliana
CCAAAAAWRGAAAND

HNTTTCYWTTTTTGG
ChIP-chip
Mathelier et al.(2014)
MA0554.1
0.750 0.750
SOC1
M10915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL20_01
0.750 0.750
Q9ATE7_PETHY
M11010_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP22_01
0.750 0.750
Q9ATE3_PETHY
M11008_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP28_01
0.750 0.750
Q9ZRA5_MALDO
M11030_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_04
0.750 0.750
Q38742_ANTMA
M11000_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SQUA_01
0.750 0.750
AGL6
M06986_2.00
Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW

WWNTTWCYWTTTTDGGWAA
Dap-seq
OMalley et al.(2016)
AGL6_col_a
0.729 0.729
SEP1
M02696_2.00
Arabidopsis thaliana
NDWNCCAWWWWTRGHAWB

VWTDCYAWWWWTGGNWHN
SELEX
Mathelier et al.(2014)
MA0584.1
0.729 0.729
SEP3
M08143_2.00
Arabidopsis thaliana
CCAAAAAWRGN

NCYWTTTTTGG
ChIP-seq
Mathelier et al.(2014)
MA0563.1
0.729 0.729
SEP1
M10929_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL2_01
0.729 0.729
SEP1
M10930_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL2_02
0.729 0.729
SEP3
M10902_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL9_01
0.729 0.729
AGL9_PETHY
M10993_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP2_01
0.729 0.729
Q9ATE8_PETHY
M11011_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP21_01
0.729 0.729
Q9ATE6_PETHY
M11009_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP23_01
0.729 0.729
Q9ATE2_PETHY
M11007_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP29_01
0.729 0.729
Q9ATF3_PETHY
M11015_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP4_01
0.729 0.729
O82084_MALDO
M11018_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_01
0.729 0.729
Q40591_TOBAC
M11002_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_03
0.729 0.729
Q6UGQ8_PETHY
M11005_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS12_01
0.729 0.729
MAD17_ORYSJ
M10961_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS17_01
0.729 0.729
MADS50
M10968_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS50_01
0.729 0.729
MADS5
M10970_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS5_02
0.729 0.729
MADS6
M10967_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS6_01
0.729 0.729
MADS7
M10975_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS7_02
0.729 0.729
MADS8
M10976_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS8_01
0.729 0.729
Q9SBA6_MALDO
M11028_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS8_02
0.729 0.729
Q84LI3_WHEAT
M10979_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT1_01
0.729 0.729
O82128_WHEAT
M10965_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WAP1_01
0.729 0.729
AGL13
M06989_2.00
Arabidopsis thaliana
WTWCYHAAAAWRGWAADW

WHTTWCYWTTTTDRGWAW
Dap-seq
OMalley et al.(2016)
AGL13_col_b
0.708 0.708
AGL16
M06987_2.00
Arabidopsis thaliana
TWCCHAAWDDGGWAA

TTWCCHHWTTDGGWA
Dap-seq
OMalley et al.(2016)
AGL16_col_a
0.708 0.708
AGL16
M06988_2.00
Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS

STTTCCHWWTWDGGWAANWHW
Dap-seq
OMalley et al.(2016)
AGL16_colamp_a
0.708 0.708
AGL42
M06995_2.00
Arabidopsis thaliana
RATGATG

CATCATY
Dap-seq
OMalley et al.(2016)
AGL42_col_a
0.708 0.708
A1YJE4_HORVD
M10900_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM10_01
0.708 0.708
Q9LEI3_HORVU
M10985_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM3_01
0.708 0.708
Q9LEI1_HORVU
M10984_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM7_01
0.708 0.708
MLOC_61901
M10964_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM8_01
0.708 0.708
Q9LEH9_HORVU
M10983_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM9_01
0.708 0.708
Q9ATF1_PETHY
M11013_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP9_01
0.708 0.708
M17_MAIZE
M10959_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M17_01
0.708 0.708
MADS1
M10969_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_02
0.708 0.708
O82699_MALDO
M11022_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_01
0.708 0.708
Q8GT99_TOBAC
M11006_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_02
0.708 0.708
MAD14_ORYSJ
M10960_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS14_01
0.708 0.708
Q9FR84_MAIZE
M10981_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_03
0.708 0.708
Q9ST54_MALDO
M11029_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_04
0.708 0.708
Q9LM09_TOBAC
M11016_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS4_01
0.708 0.708
O82695_MALDO
M11019_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS5_01
0.708 0.708
MAD55_ORYSJ
M10962_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS55_01
0.708 0.708
O82697_MALDO
M11020_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS7_01
0.708 0.708
Q9SBQ1_PETHY
M11017_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PFG_01
0.708 0.708
Q4U0F1_WHEAT
M10978_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT2_01
0.708 0.708
Q41829_MAIZE
M10977_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_02
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf018870m MADS box 10 57

Links

Other MADS box family TFs
Other Mimulus guttatus TFs

1068 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.000
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.000
GPRI1 Arabidopsis thaliana AT2G20570 D 0.000
APRR2 Arabidopsis thaliana AT4G18020 D 0.000
GLK2 Arabidopsis thaliana AT5G44190 I 0.000
Bo1g019180 Brassica oleracea Bo1g019180 I 0.000
Bo7g105690 Brassica oleracea Bo7g105690 I 0.000
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.000
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.000
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.000
Bra012623 Brassica rapa Bra012623 I 0.000
Bra013277 Brassica rapa Bra013277 I 0.000
Bra013278 Brassica rapa Bra013278 I 0.000
Bra013279 Brassica rapa Bra013279 I 0.000
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.000
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.000
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.000
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.000
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.000
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.000
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.000
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.000
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.000
Ca_02285 Cicer arietinum Ca_02285 I 0.000
Ca_12825 Cicer arietinum Ca_12825 I 0.000
Ca_24009 Cicer arietinum Ca_24009 I 0.000
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.000
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.000
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.000
Cla003791 Citrullus lanatus Cla003791 I 0.000
Cla008926 Citrullus lanatus Cla008926 I 0.000
Cla016403 Citrullus lanatus Cla016403 I 0.000
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.000
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.000
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.000
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.000
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.000
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.000
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.000
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.000
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.000
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.000
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.000
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.000
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.000
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.000
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.000
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.000
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.000
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.000
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I 0.000
Lus10003013.g Linum usitatissimum Lus10003013.g I 0.000
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.000
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.000
Lus10030938.g Linum usitatissimum Lus10030938.g I 0.000
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.000
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.000
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.000
MDP0000237396 Malus domestica MDP0000237396 I 0.000
MDP0000248863 Malus domestica MDP0000248863 I 0.000
mgf007181m Mimulus guttatus mgf007181m I 0.000
mgf012846m Mimulus guttatus mgf012846m I 0.000
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.000
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.000
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.000
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.000
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.000
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.000
PK19826.1 Cannabis sativa PK19826.1 I 0.000
Pm014733 Prunus mume Pm014733 I 0.000
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.000
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I 0.000
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.000
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I 0.000
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.000
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.000
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.000
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.000
TCM_015780 Theobroma cacao TCM_015780 I 0.000
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.000
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.000
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.000