CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf025532m
(
Mimulus guttatus
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
mgf025532m
T257469_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL6
M06986_2.00
Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA
Dap-seq
OMalley et al.(2016)
AGL6_col_a
0.708
0.708
A1YJE4_HORVD
M10900_2.00
Hordeum vulgare
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM10_01
0.708
0.708
MAD17_ORYSJ
M10961_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS17_01
0.708
0.708
MADS6
M10967_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS6_01
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf025532m
MADS box
10
57
RIEDNGARMVCFSKRRNGLIKKAKELSVLCDVDVAAIIFSKRGKLFQF
Links
Other
MADS box
family TFs
Other
Mimulus guttatus
TFs
160 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mgf020918m
Mimulus guttatus
mgf020918m
N
0.958
mgf023075m
Mimulus guttatus
mgf023075m
I
0.938
mgf022608m
Mimulus guttatus
mgf022608m
N
0.917
mgf020639m
Mimulus guttatus
mgf020639m
I
0.896
mgf021058m
Mimulus guttatus
mgf021058m
N
0.875
mgf021129m
Mimulus guttatus
mgf021129m
N
0.875
mgf020145m
Mimulus guttatus
mgf020145m
N
0.854
mgf013840m
Mimulus guttatus
mgf013840m
N
0.854
mgf010954m
Mimulus guttatus
mgf010954m
N
0.833
mgf026300m
Mimulus guttatus
mgf026300m
N
0.833
mgf023854m
Mimulus guttatus
mgf023854m
N
0.812
mgf017475m
Mimulus guttatus
mgf017475m
I
0.812
mgf024558m
Mimulus guttatus
mgf024558m
N
0.792
Cucsa.251170
Cucumis sativus
Cucsa.251170
I
0.771
Cla006333
Citrullus lanatus
Cla006333
I
0.771
GSMUA_Achr11G07760_001
Musa acuminata
GSMUA_Achr11G07760_001
I
0.729
GSMUA_Achr8G28220_001
Musa acuminata
GSMUA_Achr8G28220_001
I
0.729
Gorai.008G115200
Gossypium raimondii
Gorai.008G115200
I
0.729
MDP0000152821
Malus domestica
MDP0000152821
I
0.729
SapurV1A.4677s0010
Salix purpurea
SapurV1A.4677s0010
I
0.729
SapurV1A.0278s0350
Salix purpurea
SapurV1A.0278s0350
I
0.729
POPTR_0001s33600
Populus trichocarpa
POPTR_0001s33600
I
0.729
Carubv10001906m.g
Capsella rubella
Carubv10001906m.g
I
0.708
Eucgr.E01330
Eucalyptus grandis
Eucgr.E01330
I
0.708
Cagra.7242s0001
Capsella grandiflora
Cagra.7242s0001
I
0.708
Bostr.25993s0209
Boechera stricta
Bostr.25993s0209
I
0.708
Bostr.25463s0138
Boechera stricta
Bostr.25463s0138
I
0.708
Carubv10023910m.g
Capsella rubella
Carubv10023910m.g
I
0.708
Cagra.0050s0135
Capsella grandiflora
Cagra.0050s0135
I
0.708
Ciclev10021911m.g
Citrus clementina
Ciclev10021911m.g
I
0.708
Eucgr.C01942
Eucalyptus grandis
Eucgr.C01942
I
0.708
Eucgr.D01939
Eucalyptus grandis
Eucgr.D01939
I
0.708
Ciclev10023160m.g
Citrus clementina
Ciclev10023160m.g
I
0.708
AGL6
Arabidopsis thaliana
AT2G45650
D
0.708
Eucgr.E00516
Eucalyptus grandis
Eucgr.E00516
I
0.708
Ciclev10022568m.g
Citrus clementina
Ciclev10022568m.g
I
0.708
Eucgr.D02425
Eucalyptus grandis
Eucgr.D02425
I
0.708
BGIOSGA016980
Oryza indica
BGIOSGA016980
I
0.708
mgf007278m
Mimulus guttatus
mgf007278m
I
0.708
GLYMA09G40230
Glycine max
GLYMA09G40230
I
0.708
GLYMA07G08890
Glycine max
GLYMA07G08890
I
0.708
mgf007062m
Mimulus guttatus
mgf007062m
I
0.708
mgf001713m
Mimulus guttatus
mgf001713m
I
0.708
GLYMA16G32540
Glycine max
GLYMA16G32540
I
0.708
Cucsa.302640
Cucumis sativus
Cucsa.302640
I
0.708
GLYMA07G08831
Glycine max
GLYMA07G08831
I
0.708
GLYMA03G02210
Glycine max
GLYMA03G02210
I
0.708
BRADI3G51800
Brachypodium distachyon
BRADI3G51800
I
0.708
evm.TU.supercontig_18.166
Carica papaya
evm.TU.supercontig_18.166
I
0.708
BGIOSGA008820
Oryza indica
BGIOSGA008820
I
0.708
BRADI3G58220
Brachypodium distachyon
BRADI3G58220
I
0.708
F775_31247
Aegilops tauschii
F775_31247
I
0.708
AGL14
Arabidopsis lyrata
fgenesh2_kg.6__3138__AT4G11880.1
I
0.708
AGL6
Arabidopsis lyrata
fgenesh2_kg.4__2761__AT2G45650.1
I
0.708
AGL14
Arabidopsis thaliana
AT4G11880
I
0.708
Gorai.004G132000
Gossypium raimondii
Gorai.004G132000
I
0.708
Pavir.Ab02707
Panicum virgatum
Pavir.Ab02707
I
0.708
Pavir.J13837
Panicum virgatum
Pavir.J13837
I
0.708
SapurV1A.0173s0340
Salix purpurea
SapurV1A.0173s0340
I
0.708
Pavir.Aa00924
Panicum virgatum
Pavir.Aa00924
I
0.708
orange1.1g037149m.g
Citrus sinensis
orange1.1g037149m.g
I
0.708
orange1.1g027691m.g
Citrus sinensis
orange1.1g027691m.g
I
0.708
orange1.1g028363m.g
Citrus sinensis
orange1.1g028363m.g
I
0.708
SapurV1A.0176s0490
Salix purpurea
SapurV1A.0176s0490
I
0.708
SapurV1A.0578s0120
Salix purpurea
SapurV1A.0578s0120
I
0.708
PK12001.1
Cannabis sativa
PK12001.1
I
0.708
PDK_20s1538871g001
Phoenix dactylifera
PDK_20s1538871g001
I
0.708
PK09312.1
Cannabis sativa
PK09312.1
I
0.708
Thhalv10028949m.g
Eutrema salsugineum
Thhalv10028949m.g
I
0.708
SapurV1A.0833s0010
Salix purpurea
SapurV1A.0833s0010
I
0.708
SapurV1A.4216s0020
Salix purpurea
SapurV1A.4216s0020
I
0.708
MDP0000574222
Malus domestica
MDP0000574222
I
0.708
Lus10018714.g
Linum usitatissimum
Lus10018714.g
I
0.708
Gorai.005G100600
Gossypium raimondii
Gorai.005G100600
I
0.708
Gorai.005G221300
Gossypium raimondii
Gorai.005G221300
I
0.708
Gorai.007G093700
Gossypium raimondii
Gorai.007G093700
I
0.708
Gorai.004G155700
Gossypium raimondii
Gorai.004G155700
I
0.708
Cucsa.202790
Cucumis sativus
Cucsa.202790
I
0.708
gene19428-v1.0-hybrid
Fragaria vesca
gene19428-v1.0-hybrid
I
0.708
Gorai.003G163900
Gossypium raimondii
Gorai.003G163900
I
0.708
Gorai.007G093800
Gossypium raimondii
Gorai.007G093800
I
0.708
Gorai.007G237300
Gossypium raimondii
Gorai.007G237300
I
0.708
Lus10014143.g
Linum usitatissimum
Lus10014143.g
I
0.708
Lus10014144.g
Linum usitatissimum
Lus10014144.g
I
0.708
Lus10006716.g
Linum usitatissimum
Lus10006716.g
I
0.708
Lus10006715.g
Linum usitatissimum
Lus10006715.g
I
0.708
Gorai.008G242700
Gossypium raimondii
Gorai.008G242700
I
0.708
Gorai.009G216900
Gossypium raimondii
Gorai.009G216900
I
0.708
evm.TU.supercontig_414.3
Carica papaya
evm.TU.supercontig_414.3
I
0.708
cassava30125.valid.m1
Manihot esculenta
cassava30125.valid.m1
I
0.708
OBART04G22790
Oryza barthii
OBART04G22790
I
0.708
OGLUM02G28590
Oryza glumaepatula
OGLUM02G28590
I
0.708
OGLUM04G22680
Oryza glumaepatula
OGLUM04G22680
I
0.708
OBART02G28030
Oryza barthii
OBART02G28030
I
0.708
OB04G29660
Oryza brachyantha
OB04G29660
I
0.708
MTR_8g033270
Medicago truncatula
MTR_8g033270
I
0.708
OB02G35340
Oryza brachyantha
OB02G35340
I
0.708
OLONG_003266
Oryza longistaminata
OLONG_003266
I
0.708
OMERI02G27210
Oryza meridionalis
OMERI02G27210
I
0.708
OPUNC04G20380
Oryza punctata
OPUNC04G20380
I
0.708
ORGLA02G0240800
Oryza glaberrima
ORGLA02G0240800
I
0.708
ORGLA04G0197900
Oryza glaberrima
ORGLA04G0197900
I
0.708
OPUNC02G25740
Oryza punctata
OPUNC02G25740
I
0.708
ONIVA04G21940
Oryza nivara
ONIVA04G21940
I
0.708
OMERI04G19060
Oryza meridionalis
OMERI04G19060
I
0.708
ONIVA02G31130
Oryza nivara
ONIVA02G31130
I
0.708
MTR_7g075870
Medicago truncatula
MTR_7g075870
I
0.708
MTR_5g032520
Medicago truncatula
MTR_5g032520
I
0.708
GRMZM2G370777
Zea mays
GRMZM2G370777
I
0.708
GSMUA_Achr1G24060_001
Musa acuminata
GSMUA_Achr1G24060_001
I
0.708
GSMUA_Achr2G04350_001
Musa acuminata
GSMUA_Achr2G04350_001
I
0.708
GRMZM2G160565
Zea mays
GRMZM2G160565
I
0.708
GRMZM2G046885
Zea mays
GRMZM2G046885
I
0.708
GLYMA18G45780
Glycine max
GLYMA18G45780
I
0.708
GRMZM2G003514
Zea mays
GRMZM2G003514
I
0.708
GSMUA_Achr2G10250_001
Musa acuminata
GSMUA_Achr2G10250_001
I
0.708
GSMUA_Achr4G30120_001
Musa acuminata
GSMUA_Achr4G30120_001
I
0.708
MAD17_ORYSJ
Oryza sativa
MAD17_ORYSJ
D
0.708
MLOC_52944
Hordeum vulgare
MLOC_52944
I
0.708
MTR_5g032150
Medicago truncatula
MTR_5g032150
I
0.708
LPERR04G18560
Leersia perrieri
LPERR04G18560
I
0.708
LPERR02G22830
Leersia perrieri
LPERR02G22830
I
0.708
GSMUA_Achr8G12280_001
Musa acuminata
GSMUA_Achr8G12280_001
I
0.708
GSMUA_Achr9G29320_001
Musa acuminata
GSMUA_Achr9G29320_001
I
0.708
ORUFI02G29550
Oryza rufipogon
ORUFI02G29550
I
0.708
ORUFI04G24470
Oryza rufipogon
ORUFI04G24470
I
0.708
VIT_15s0048g01240
Vitis vinifera
VIT_15s0048g01240
I
0.708
VIT_15s0048g01270
Vitis vinifera
VIT_15s0048g01270
I
0.708
VIT_16s0022g02330
Vitis vinifera
VIT_16s0022g02330
I
0.708
TRIUR3_22246
Triticum urartu
TRIUR3_22246
I
0.708
Traes_6DL_D8C9E421C
Triticum aestivum
Traes_6DL_D8C9E421C
I
0.708
Traes_6BL_7C6B17284
Triticum aestivum
Traes_6BL_7C6B17284
I
0.708
Traes_6DL_5B1D4DBF5
Triticum aestivum
Traes_6DL_5B1D4DBF5
I
0.708
A1YJE4_HORVD
Hordeum vulgare
A1YJE4_HORVD
D
0.708
Cla007056
Citrullus lanatus
Cla007056
I
0.708
30174.m008934
Ricinus communis
30174.m008934
I
0.708
cassava25616.m1
Manihot esculenta
cassava25616.m1
I
0.708
GLYMA18G45761
Glycine max
GLYMA18G45761
I
0.708
30170.m013776
Ricinus communis
30170.m013776
I
0.708
Pm023734
Prunus mume
Pm023734
I
0.708
Cla011687
Citrullus lanatus
Cla011687
I
0.708
Pm018087
Prunus mume
Pm018087
I
0.708
Traes_6AL_A93C6F2FC
Triticum aestivum
Traes_6AL_A93C6F2FC
I
0.708
Traes_6AL_1F7DAC5FA
Triticum aestivum
Traes_6AL_1F7DAC5FA
I
0.708
PRUPE_ppb018415mg
Prunus persica
PRUPE_ppb018415mg
I
0.708
Sb04g031750
Sorghum bicolor
Sb04g031750
I
0.708
Sb04g033930
Sorghum bicolor
Sb04g033930
I
0.708
PRUPE_ppa019932mg
Prunus persica
PRUPE_ppa019932mg
I
0.708
POPTR_0015s14010
Populus trichocarpa
POPTR_0015s14010
I
0.708
MADS6
Oryza sativa
OS02G0682200
D
0.708
OS04G0580700
Oryza sativa
OS04G0580700
I
0.708
Si017524m.g
Setaria italica
Si017524m.g
I
0.708
Si018160m.g
Setaria italica
Si018160m.g
I
0.708
TCM_005458
Theobroma cacao
TCM_005458
I
0.708
TCM_016147
Theobroma cacao
TCM_016147
I
0.708
TCM_005456
Theobroma cacao
TCM_005456
I
0.708
Solyc06g035570.1
Solanum lycopersicum
Solyc06g035570.1
I
0.708
Si030960m.g
Setaria italica
Si030960m.g
I
0.708
Solyc05g015730.1
Solanum lycopersicum
Solyc05g015730.1
I
0.708
cassava723.valid.m1
Manihot esculenta
cassava723.valid.m1
I
0.708