Aquca_002_00641 (Aquilegia coerulea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Aquca_002_00641 T257487_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_002_00641.1 MADS box 10 55
Aquca_002_00641.2 MADS box 10 55
Aquca_002_00641.3 MADS box 10 55

Links

Other MADS box family TFs
Other Aquilegia coerulea TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.957
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.936
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.891
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.891
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.854
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.854
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.848
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.848
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.848
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.848
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.848
F775_13266 Aegilops tauschii F775_13266 I 0.848
30138.m004061 Ricinus communis 30138.m004061 I 0.833
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.833
TCM_014051 Theobroma cacao TCM_014051 I 0.833
PK21701.1 Cannabis sativa PK21701.1 I 0.833
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.833
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.833
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.830
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.830
Bra025685 Brassica rapa Bra025685 I 0.830
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.826
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.826
Cla010361 Citrullus lanatus Cla010361 I 0.826
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.826
Bo8g068060 Brassica oleracea Bo8g068060 I 0.812
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.812
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.812
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.812
Bra031049 Brassica rapa Bra031049 I 0.812
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.812
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.812
Bra016544 Brassica rapa Bra016544 I 0.812
Bo8g104060 Brassica oleracea Bo8g104060 I 0.812
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.804
Si028357m.g Setaria italica Si028357m.g N 0.804
Pm006479 Prunus mume Pm006479 I 0.804
MDP0000147667 Malus domestica MDP0000147667 I 0.804
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.804
MDP0000146231 Malus domestica MDP0000146231 I 0.804
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.804
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.804
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.804
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.804
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.804
MDP0000919323 Malus domestica MDP0000919323 I 0.800
MDP0000146415 Malus domestica MDP0000146415 I 0.800
MDP0000773068 Malus domestica MDP0000773068 I 0.800
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.792
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.787
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.783
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.783
29813.m001508 Ricinus communis 29813.m001508 I 0.783
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.783
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.783
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.783
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.783
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.783
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.783
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.783
OBART11G21780 Oryza barthii OBART11G21780 N 0.783
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.783
OS11G0658700 Oryza sativa OS11G0658700 N 0.783
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.783
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.783
Ca_18082 Cicer arietinum Ca_18082 I 0.783
Cla018884 Citrullus lanatus Cla018884 I 0.783
TCM_011687 Theobroma cacao TCM_011687 I 0.783
PK03147.1 Cannabis sativa PK03147.1 I 0.783
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.783
AGL65 Arabidopsis thaliana AT1G18750 D 0.771
mgf000945m Mimulus guttatus mgf000945m I 0.771
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.771
mgf004425m Mimulus guttatus mgf004425m I 0.771
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.771
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.766
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.761
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.761
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.761
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.761
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.761
AGL30 Arabidopsis thaliana AT2G03060 I 0.761
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.761
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.761
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.761
AGL33 Populus trichocarpa POPTR_0018s08400 N 0.761
Pm024895 Prunus mume Pm024895 I 0.761
Ca_16376 Cicer arietinum Ca_16376 I 0.761
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.761
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.761
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.761
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.761
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.761
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.750
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.750
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.739
Bra024792 Brassica rapa Bra024792 I 0.739
OPUNC11G18320 Oryza punctata OPUNC11G18320 N 0.739
Bo7g080890 Brassica oleracea Bo7g080890 I 0.739
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.739
Bo9g072860 Brassica oleracea Bo9g072860 N 0.739
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I 0.729
MDP0000193129 Malus domestica MDP0000193129 I 0.729
PGSC0003DMG400019525 Solanum tuberosum PGSC0003DMG400019525 N 0.723
Traes_7BL_7F4124E70 Triticum aestivum Traes_7BL_7F4124E70 I 0.720
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.717
Ciclev10010259m.g Citrus clementina Ciclev10010259m.g N 0.717
Bra017404 Brassica rapa Bra017404 I 0.717
GSMUA_Achr11G14240_001 Musa acuminata GSMUA_Achr11G14240_001 N 0.717
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.702