CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.0556s0683
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.0556s0683
T257554_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.0556s0683.1.p
MADS box
24
73
RETKQQRSVACSKRRQSLFSKAADLCVLGGANVAVFVTSPAEKSNVVYSF
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10019521m.g
Capsella rubella
Carubv10019521m.g
N
0.870
Carubv10001421m.g
Capsella rubella
Carubv10001421m.g
N
0.854
Thhalv10015516m.g
Eutrema salsugineum
Thhalv10015516m.g
N
0.854
Cagra.6165s0001
Capsella grandiflora
Cagra.6165s0001
N
0.854
scaffold_501175.1
Arabidopsis lyrata
scaffold_501175.1
N
0.844
AT1G48150
Arabidopsis thaliana
AT1G48150
N
0.830
Bostr.29827s0025
Boechera stricta
Bostr.29827s0025
N
0.812
AGL39
Arabidopsis thaliana
AT5G27130
N
0.771