CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.15697s0422
(
Boechera stricta
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Bostr.15697s0422
T257582_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL63
M06982_2.00
Arabidopsis thaliana
TDCCAAAAWHGGMAA
TTKCCDWTTTTGGHA
Dap-seq
OMalley et al.(2016)
AGL63_col_a
0.854
0.854
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.15697s0422.1.p
MADS box
10
57
KIEDKLRRQVTFAKRRKSLIKKAHELSVLCDVHLGLIIFSYSNKLYDF
Links
Other
MADS box
family TFs
Other
Boechera stricta
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy