Bostr.22252s0371 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.22252s0371 T257600_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL91
M10922_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G66656_01
0.979 0.979
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.22252s0371.1.p MADS box 10 57

Links

Other MADS box family TFs
Other Boechera stricta TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.979
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.979
AGL91 Arabidopsis thaliana AT3G66656 D 0.979
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.958
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.958
Bra001209 Brassica rapa Bra001209 I 0.896
Bo3g060720 Brassica oleracea Bo3g060720 I 0.875
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.833
Ca_24185 Cicer arietinum Ca_24185 I 0.833
Bo4g182590 Brassica oleracea Bo4g182590 I 0.833
Bra021910 Brassica rapa Bra021910 I 0.833
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.812
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.812
AGL29 Arabidopsis thaliana AT2G34440 I 0.812
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.812
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.812
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.771
Ca_05023 Cicer arietinum Ca_05023 I 0.771
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.771
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.771
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.771
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.750
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.750
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.750
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.750
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.729
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.729
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.729
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.729
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.729
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.729
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.729
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.729
MDP0000168914 Malus domestica MDP0000168914 N 0.708
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.708
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.708
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.708
TCM_029518 Theobroma cacao TCM_029518 I 0.708
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.708
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.708
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.708
TCM_006324 Theobroma cacao TCM_006324 N 0.708
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.708
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.708
29693.m002039 Ricinus communis 29693.m002039 I 0.708
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.708