Bostr.23794s0666 (Boechera stricta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Bostr.23794s0666 T257601_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL91
M10922_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G66656_01
0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.23794s0666.1.p MADS box 10 57

Links

Other MADS box family TFs
Other Boechera stricta TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 1.000
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 1.000
AGL29 Arabidopsis thaliana AT2G34440 I 1.000
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 1.000
Bo4g182590 Brassica oleracea Bo4g182590 I 0.979
Bra021910 Brassica rapa Bra021910 I 0.979
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.979
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.833
AGL91 Arabidopsis thaliana AT3G66656 D 0.833
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.833
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.833
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.833
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.812
Pm030655 Prunus mume Pm030655 I 0.792
TCM_029518 Theobroma cacao TCM_029518 I 0.792
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.792
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.792
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.792
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.792
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.792
29693.m002039 Ricinus communis 29693.m002039 I 0.792
Bo3g060720 Brassica oleracea Bo3g060720 I 0.792
Bra001209 Brassica rapa Bra001209 I 0.792
Ca_05023 Cicer arietinum Ca_05023 I 0.771
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.771
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.750
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.750
MDP0000274606 Malus domestica MDP0000274606 N 0.750
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.750
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.750
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.750
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.750
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.750
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.750
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.729
Cla019897 Citrullus lanatus Cla019897 N 0.729
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.729
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.729
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.729
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.729
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.708
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.708
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.708
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.708
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.708
Ca_24185 Cicer arietinum Ca_24185 I 0.708
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.708
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.708
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.708
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.708
Lus10011787.g Linum usitatissimum Lus10011787.g N 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.708