Carubv10012265m.g (Capsella rubella)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Carubv10012265m.g T257769_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL63
M06982_2.00 		Arabidopsis thaliana
TDCCAAAAWHGGMAA
TTKCCDWTTTTGGHA		 Dap-seq
OMalley et al.(2016)
AGL63_col_a 		0.833 0.833
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10012265m MADS box 10 57

Links

Other MADS box family TFs
Other Capsella rubella TFs

Invalid Input OrderBy

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action