CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10003812m.g
(
Citrus clementina
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Ciclev10003812m.g
T257851_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10003812m
MADS box
5
51
KIKIRKIDNIIFVYKRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE
Links
Other
MADS box
family TFs
Other
Citrus clementina
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g027190m.g
Citrus sinensis
orange1.1g027190m.g
I
0.745
orange1.1g040972m.g
Citrus sinensis
orange1.1g040972m.g
I
0.745
POPTR_0002s10570
Populus trichocarpa
POPTR_0002s10570
I
0.723
SapurV1A.0004s1140
Salix purpurea
SapurV1A.0004s1140
I
0.723
Gorai.002G142700
Gossypium raimondii
Gorai.002G142700
I
0.702
TCM_034501
Theobroma cacao
TCM_034501
I
0.702
AMTR_s00127p00060060
Amborella trichopoda
AMTR_s00127p00060060
I
0.702
Gorai.010G035000
Gossypium raimondii
Gorai.010G035000
I
0.702