Ciclev10006500m.g (Citrus clementina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ciclev10006500m.g T257858_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10006500m MADS box 16 63

Links

Other MADS box family TFs
Other Citrus clementina TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.938
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.896
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.875
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.875
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.833
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.812
Ciclev10006803m.g Citrus clementina Ciclev10006803m.g N 0.792
Ciclev10006740m.g Citrus clementina Ciclev10006740m.g N 0.792
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.771
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.771
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.771
orange1.1g040485m.g Citrus sinensis orange1.1g040485m.g N 0.750
Cla009921 Citrullus lanatus Cla009921 N 0.750
29693.m002041 Ricinus communis 29693.m002041 N 0.750
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.750
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.750
orange1.1g047467m.g Citrus sinensis orange1.1g047467m.g N 0.729
Ciclev10007015m.g Citrus clementina Ciclev10007015m.g N 0.729
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.729
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.729
29693.m002042 Ricinus communis 29693.m002042 N 0.729
Ciclev10006427m.g Citrus clementina Ciclev10006427m.g N 0.729
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.708
Pm008734 Prunus mume Pm008734 N 0.708
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.708
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.708