CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10006615m.g
(
Citrus clementina
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Ciclev10006615m.g
T257866_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10006615m
MADS box
16
63
KIENEDDRMMTFSKRRPGIYKKACELVTLTGAEIGIVLFSLSGKPFTF
Links
Other
MADS box
family TFs
Other
Citrus clementina
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10006500m.g
Citrus clementina
Ciclev10006500m.g
N
0.938
Ciclev10007104m.g
Citrus clementina
Ciclev10007104m.g
N
0.875
Ciclev10006958m.g
Citrus clementina
Ciclev10006958m.g
N
0.854
Ciclev10006503m.g
Citrus clementina
Ciclev10006503m.g
N
0.854
Ciclev10006708m.g
Citrus clementina
Ciclev10006708m.g
N
0.812
Ciclev10007010m.g
Citrus clementina
Ciclev10007010m.g
N
0.792
Ciclev10007090m.g
Citrus clementina
Ciclev10007090m.g
N
0.792
Ciclev10006559m.g
Citrus clementina
Ciclev10006559m.g
N
0.792
Ciclev10006803m.g
Citrus clementina
Ciclev10006803m.g
N
0.771
Ciclev10006740m.g
Citrus clementina
Ciclev10006740m.g
N
0.771
Ciclev10006587m.g
Citrus clementina
Ciclev10006587m.g
N
0.767
Ciclev10006427m.g
Citrus clementina
Ciclev10006427m.g
N
0.756
orange1.1g044532m.g
Citrus sinensis
orange1.1g044532m.g
N
0.750
orange1.1g047467m.g
Citrus sinensis
orange1.1g047467m.g
N
0.750
Ciclev10007015m.g
Citrus clementina
Ciclev10007015m.g
N
0.750
Ciclev10006530m.g
Citrus clementina
Ciclev10006530m.g
N
0.750
Ciclev10006957m.g
Citrus clementina
Ciclev10006957m.g
N
0.750
29693.m002041
Ricinus communis
29693.m002041
N
0.729
Cla009921
Citrullus lanatus
Cla009921
N
0.729
orange1.1g040485m.g
Citrus sinensis
orange1.1g040485m.g
N
0.729
POPTR_0001s25850
Populus trichocarpa
POPTR_0001s25850
N
0.729
Cucsa.047600
Cucumis sativus
Cucsa.047600
N
0.729
Ciclev10006439m.g
Citrus clementina
Ciclev10006439m.g
N
0.729
orange1.1g038327m.g
Citrus sinensis
orange1.1g038327m.g
N
0.722
Ciclev10006588m.g
Citrus clementina
Ciclev10006588m.g
N
0.721
29693.m002042
Ricinus communis
29693.m002042
N
0.708
cassava9826.m1
Manihot esculenta
cassava9826.m1
N
0.708