Ciclev10006708m.g (Citrus clementina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ciclev10006708m.g T257868_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10006708m MADS box 16 63

Links

Other MADS box family TFs
Other Citrus clementina TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.938
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.938
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.917
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.917
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.833
Ciclev10006500m.g Citrus clementina Ciclev10006500m.g N 0.833
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.833
Cla009921 Citrullus lanatus Cla009921 N 0.833
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.812
29693.m002042 Ricinus communis 29693.m002042 N 0.812
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.792
29693.m002041 Ricinus communis 29693.m002041 N 0.792
Ciclev10006559m.g Citrus clementina Ciclev10006559m.g N 0.792
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.792
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.792
Ciclev10007090m.g Citrus clementina Ciclev10007090m.g N 0.792
Ciclev10006803m.g Citrus clementina Ciclev10006803m.g N 0.792
Pm008734 Prunus mume Pm008734 N 0.792
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.792
Ciclev10006740m.g Citrus clementina Ciclev10006740m.g N 0.792
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.771
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.771
Ciclev10006427m.g Citrus clementina Ciclev10006427m.g N 0.756
Ciclev10006743m.g Citrus clementina Ciclev10006743m.g N 0.750
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.750
orange1.1g040485m.g Citrus sinensis orange1.1g040485m.g N 0.750
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.750
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.750
Ciclev10006587m.g Citrus clementina Ciclev10006587m.g N 0.733
MDP0000696333 Malus domestica MDP0000696333 N 0.729
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.729
Eucgr.E02870 Eucalyptus grandis Eucgr.E02870 N 0.729
Ciclev10006546m.g Citrus clementina Ciclev10006546m.g N 0.725
orange1.1g038327m.g Citrus sinensis orange1.1g038327m.g N 0.722
Ciclev10006588m.g Citrus clementina Ciclev10006588m.g N 0.721
cassava46357.m1 Manihot esculenta cassava46357.m1 N 0.708
orange1.1g047467m.g Citrus sinensis orange1.1g047467m.g N 0.708
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.708
Ciclev10007015m.g Citrus clementina Ciclev10007015m.g N 0.708
Eucgr.E02872 Eucalyptus grandis Eucgr.E02872 N 0.708
Eucgr.E02824 Eucalyptus grandis Eucgr.E02824 N 0.708
Eucgr.E02827 Eucalyptus grandis Eucgr.E02827 N 0.708
Eucgr.E02829 Eucalyptus grandis Eucgr.E02829 N 0.708
Eucgr.L01236 Eucalyptus grandis Eucgr.L01236 N 0.708