Ciclev10006958m.g (Citrus clementina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ciclev10006958m.g T257873_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10006958m MADS box 18 65

Links

Other MADS box family TFs
Other Citrus clementina TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.979
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.979
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.917
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.896
Ciclev10006500m.g Citrus clementina Ciclev10006500m.g N 0.875
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.854
Ciclev10006427m.g Citrus clementina Ciclev10006427m.g N 0.844
Ciclev10006740m.g Citrus clementina Ciclev10006740m.g N 0.833
Ciclev10006803m.g Citrus clementina Ciclev10006803m.g N 0.833
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.833
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.833
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.833
29693.m002041 Ricinus communis 29693.m002041 N 0.833
Cla009921 Citrullus lanatus Cla009921 N 0.833
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.833
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.833
29693.m002042 Ricinus communis 29693.m002042 N 0.812
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.812
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.792
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.792
orange1.1g040485m.g Citrus sinensis orange1.1g040485m.g N 0.792
Pm008734 Prunus mume Pm008734 N 0.792
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.792
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.792
orange1.1g038327m.g Citrus sinensis orange1.1g038327m.g N 0.778
Eucgr.E02870 Eucalyptus grandis Eucgr.E02870 N 0.771
Ciclev10006743m.g Citrus clementina Ciclev10006743m.g N 0.771
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.771
orange1.1g047467m.g Citrus sinensis orange1.1g047467m.g N 0.750
Eucgr.E02827 Eucalyptus grandis Eucgr.E02827 N 0.750
Eucgr.E02824 Eucalyptus grandis Eucgr.E02824 N 0.750
Ciclev10007015m.g Citrus clementina Ciclev10007015m.g N 0.750
Eucgr.E02829 Eucalyptus grandis Eucgr.E02829 N 0.750
Ciclev10006546m.g Citrus clementina Ciclev10006546m.g N 0.750
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.750
Ciclev10006587m.g Citrus clementina Ciclev10006587m.g N 0.733
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.729
orange1.1g039494m.g Citrus sinensis orange1.1g039494m.g N 0.729
SapurV1A.1613s0060 Salix purpurea SapurV1A.1613s0060 N 0.729
SapurV1A.2714s0010 Salix purpurea SapurV1A.2714s0010 N 0.729
Eucgr.E02872 Eucalyptus grandis Eucgr.E02872 N 0.729
SapurV1A.0619s0200 Salix purpurea SapurV1A.0619s0200 N 0.729
Eucgr.L01236 Eucalyptus grandis Eucgr.L01236 N 0.729
Ciclev10006405m.g Citrus clementina Ciclev10006405m.g N 0.729
cassava46357.m1 Manihot esculenta cassava46357.m1 N 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Ciclev10006588m.g Citrus clementina Ciclev10006588m.g N 0.721
MDP0000696333 Malus domestica MDP0000696333 N 0.708
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Pm030654 Prunus mume Pm030654 N 0.708