Ciclev10007090m.g (Citrus clementina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ciclev10007090m.g T257876_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10007090m MADS box 16 39

Links

Other MADS box family TFs
Other Citrus clementina TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g040485m.g Citrus sinensis orange1.1g040485m.g N 0.917
Pm008734 Prunus mume Pm008734 N 0.917
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.917
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.875
Ciclev10006559m.g Citrus clementina Ciclev10006559m.g N 0.875
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.875
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.833
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.833
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.833
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.833
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.792
orange1.1g039494m.g Citrus sinensis orange1.1g039494m.g N 0.792
Ciclev10007015m.g Citrus clementina Ciclev10007015m.g N 0.792
Ciclev10006405m.g Citrus clementina Ciclev10006405m.g N 0.792
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.792
orange1.1g047467m.g Citrus sinensis orange1.1g047467m.g N 0.792
Ciclev10006743m.g Citrus clementina Ciclev10006743m.g N 0.792
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.792
Gorai.010G132200 Gossypium raimondii Gorai.010G132200 N 0.750
SapurV1A.2714s0010 Salix purpurea SapurV1A.2714s0010 N 0.708
Solyc10g018080.1 Solanum lycopersicum Solyc10g018080.1 N 0.708
SapurV1A.1613s0060 Salix purpurea SapurV1A.1613s0060 N 0.708
SapurV1A.0619s0200 Salix purpurea SapurV1A.0619s0200 N 0.708
Gorai.010G133000 Gossypium raimondii Gorai.010G133000 N 0.708
Gorai.010G132900 Gossypium raimondii Gorai.010G132900 N 0.708
Gorai.010G133100 Gossypium raimondii Gorai.010G133100 N 0.708
Gorai.010G133300 Gossypium raimondii Gorai.010G133300 N 0.708
Gorai.009G333500 Gossypium raimondii Gorai.009G333500 N 0.700