Ciclev10013728m.g (Citrus clementina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ciclev10013728m.g T257885_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL80
M06994_2.00
Arabidopsis thaliana
TCACCA

TGGTGA
Dap-seq
OMalley et al.(2016)
FEM111_col_a
0.854 0.854
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10013728m MADS box 10 58

Links

Other MADS box family TFs
Other Citrus clementina TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_05301 Capronia coronata A1O1_05301 I 0.000
A1O3_09463 Capronia epimyces A1O3_09463 I 0.000
A1O9_04358 Exophiala aquamarina A1O9_04358 I 0.000
ACRE_086950 Acremonium chrysogenum ACRE_086950 I 0.000
BBA_07230 Beauveria bassiana BBA_07230 I 0.000
Bcin10g00520 Botrytis cinerea Bcin10g00520 I 0.000
ACLA_058410 Aspergillus clavatus CADACLAG00005638 I 0.000
AFUA_8G05010 Aspergillus fumigatus CADAFUAG00002982 I 0.000
CADANGAG00013243 Aspergillus niger CADANGAG00013243 I 0.000
NFIA_097820 Neosartorya fischeri CADNFIAG00008857 I 0.000
CCM_03986 Cordyceps militaris CCM_03986 I 0.000
CFIO01_09458 Colletotrichum fioriniae CFIO01_09458 I 0.000
CGGC5_941 Colletotrichum gloeosporioides CGGC5_941 I 0.000
CH063_02646 Colletotrichum higginsianum CH063_02646 I 0.000
Cob_10292 Colletotrichum orbiculare Cob_10292 I 0.000
CPUR_07913 Claviceps purpurea CPUR_07913 I 0.000
CSUB01_03484 Colletotrichum sublineola CSUB01_03484 I 0.000
CTHT_0067990 Chaetomium thermophilum CTHT_0067990 I 0.000
EPUS_00874 Endocarpon pusillum EPUS_00874 I 0.000
estExt_fgenesh3_kg.C_10150 Neurospora discreta estExt_fgenesh3_kg.C_10150 I 0.000
e_gw1.00168.127.1 Aspergillus carbonarius e_gw1.00168.127.1 I 0.000
e_gw1.13.52.1 Cryphonectria parasitica e_gw1.13.52.1 I 0.000
FFUJ_12194 Fusarium fujikuroi FFUJ_12194 I 0.000
fgenesh1_pm.sca_14_chr10_3_0000034 Nectria haematococca fgenesh1_pm.sca_14_chr10_3_0000034 I 0.000
FGRRES_01877 Fusarium graminearum FGRRES_01877 D 0.000
FOXG_04255 Fusarium oxysporum FOXG_04255 I 0.000
FPSE_05401 Fusarium pseudograminearum FPSE_05401 I 0.000
FVEG_07376 Fusarium verticillioides FVEG_07376 I 0.000
G647_02686 Cladophialophora carrionii G647_02686 I 0.000
GGTG_10509 Gaeumannomyces graminis GGTG_10509 I 0.000
GLRG_01267 Colletotrichum graminicola GLRG_01267 I 0.000
HMPREF1624_00616 Sporothrix schenckii HMPREF1624_00616 I 0.000
M7I_6075 Glarea lozoyensis M7I_6075 I 0.000
MAC_08573 Metarhizium acridum MAC_08573 I 0.000
MAJ_03692 Metarhizium majus MAJ_03692 I 0.000
MAM_01703 Metarhizium album MAM_01703 I 0.000
MANI_018170 Metarhizium anisopliae MANI_018170 I 0.000
MAPG_09942 Magnaporthe poae MAPG_09942 I 0.000
MBM_09935 Marssonina brunnea MBM_09935 I 0.000
MBR_07462 Metarhizium brunneum MBR_07462 I 0.000
MGU_03754 Metarhizium guizhouense MGU_03754 I 0.000
MYCTH_2302052 Myceliophthora thermophila MYCTH_2302052 I 0.000
NCU03699 Neurospora crassa NCU03699 D 0.000
NechaG96840 Fusarium solani NechaG96840 I 0.000
NEUTE1DRAFT_120248 Neurospora tetrasperma NEUTE1DRAFT_120248 I 0.000
OIDMADRAFT_154644 Oidiodendron maius OIDMADRAFT_154644 I 0.000
Pc20g10390 Penicillium chrysogenum Pc20g10390 I 0.000
PCH_Pc20g10390 Penicillium rubens PCH_Pc20g10390 I 0.000
PDIP_02690 Penicillium digitatum PDIP_02690 I 0.000
PEX1_035970 Penicillium expansum PEX1_035970 I 0.000
PFICI_07570 Pestalotiopsis fici PFICI_07570 I 0.000
PITC_051250 Penicillium italicum PITC_051250 I 0.000
PMAA_059470 Penicillium marneffei PMAA_059470 I 0.000
PMAA_059470 Talaromyces marneffei PMAA_059470 I 0.000
PODANS_2_11930 Podospora anserina PODANS_2_11930 I 0.000
PV04_07860 Capronia semiimmersa PV04_07860 I 0.000
PV09_06044 Verruconis gallopava PV09_06044 I 0.000
S40285_05279 Stachybotrys chlorohalonata S40285_05279 I 0.000
S40285_08669 Stachybotrys chlorohalonata S40285_08669 I 0.000
S40288_05686 Stachybotrys chartarum S40288_05686 I 0.000
SAPIO_CDS0518 Scedosporium apiospermum SAPIO_CDS0518 I 0.000
SBOR_5756 Sclerotinia borealis SBOR_5756 I 0.000
SEPMUDRAFT_146750 Sphaerulina musiva SEPMUDRAFT_146750 I 0.000
SMAC_02564 Sordaria macrospora SMAC_02564 I 0.000
THITE_2108211 Thielavia terrestris THITE_2108211 I 0.000
TRIATDRAFT_163506 Trichoderma atroviride TRIATDRAFT_163506 I 0.000
TRIREDRAFT_27649 Trichoderma reesei TRIREDRAFT_27649 I 0.000
TRIVIDRAFT_175568 Trichoderma virens TRIVIDRAFT_175568 I 0.000
TSTA_012520 Talaromyces stipitatus TSTA_012520 I 0.000
U727_00434251371 Penicillium solitum U727_00434251371 I 0.000
UCREL1_5559 Eutypa lata UCREL1_5559 I 0.000
UCRPA7_8393 Togninia minima UCRPA7_8393 I 0.000
UV8b_2720 Ustilaginoidea virens UV8b_2720 I 0.000
VDAG_04603 Verticillium dahliae VDAG_04603 I 0.000
VDBG_09365 Verticillium albo atrum VDBG_09365 I 0.000
VDBG_09365 Verticillium alfalfae VDBG_09365 I 0.000
VHEMI10121 Torrubiella hemipterigena VHEMI10121 I 0.000
X797_003437 Metarhizium robertsii X797_003437 I 0.000
Z517_02728 Fonsecaea pedrosoi Z517_02728 I 0.000
Z518_09288 Rhinocladiella mackenziei Z518_09288 I 0.000