Eucgr.B00522 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.B00522 T257928_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B00522.1 MADS box 10 57
Eucgr.B00522.2 MADS box 10 57
Eucgr.B00522.3 MADS box 10 57

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
FRS5 Arabidopsis thaliana AT4G38180 N 0.000
mgf015959m Mimulus guttatus mgf015959m N 0.000
Aquca_007_00960 Aquilegia coerulea Aquca_007_00960 N 0.000
Bostr.25542s0007 Boechera stricta Bostr.25542s0007 N 0.000
Cagra.1383s0007 Capsella grandiflora Cagra.1383s0007 N 0.000
Carubv10007256m.g Capsella rubella Carubv10007256m.g N 0.000
Ciclev10027888m.g Citrus clementina Ciclev10027888m.g N 0.000
Eucgr.I01547 Eucalyptus grandis Eucgr.I01547 N 0.000
evm.TU.supercontig_60.4 Carica papaya evm.TU.supercontig_60.4 N 0.000
gene12983-v1.0-hybrid Fragaria vesca gene12983-v1.0-hybrid N 0.000
gene17117-v1.0-hybrid Fragaria vesca gene17117-v1.0-hybrid N 0.000
Gorai.013G065300 Gossypium raimondii Gorai.013G065300 N 0.000
MDP0000200105 Malus domestica MDP0000200105 N 0.000
MDP0000261311 Malus domestica MDP0000261311 N 0.000
MDP0000308670 Malus domestica MDP0000308670 N 0.000
SapurV1A.0216s0420 Salix purpurea SapurV1A.0216s0420 N 0.000
SapurV1A.2929s0020 Salix purpurea SapurV1A.2929s0020 N 0.000
Thhalv10024456m.g Eutrema salsugineum Thhalv10024456m.g N 0.000
Cucsa.099970 Cucumis sativus Cucsa.099970 N 0.000
cassava9536.m1 Manihot esculenta cassava9536.m1 N 0.000
Bo3g034290 Brassica oleracea Bo3g034290 N 0.000
GLYMA01G00321 Glycine max GLYMA01G00321 N 0.000
GLYMA11G09400 Glycine max GLYMA11G09400 N 0.000
GLYMA14G00240 Glycine max GLYMA14G00240 N 0.000
POPTR_0004s21880 Populus trichocarpa POPTR_0004s21880 N 0.000
POPTR_0009s17110 Populus trichocarpa POPTR_0009s17110 N 0.000
POPTR_0011s14880 Populus trichocarpa POPTR_0011s14880 N 0.000
PRUPE_ppa001597mg Prunus persica PRUPE_ppa001597mg N 0.000
PRUPE_ppa001606mg Prunus persica PRUPE_ppa001606mg N 0.000
Solyc01g112320.2 Solanum lycopersicum Solyc01g112320.2 N 0.000
TCM_007609 Theobroma cacao TCM_007609 N 0.000
FRS5 Vitis vinifera VIT_03s0038g04140 N 0.000
VIT_04s0044g01920 Vitis vinifera VIT_04s0044g01920 N 0.000
Cla015971 Citrullus lanatus Cla015971 N 0.000
Pm020704 Prunus mume Pm020704 N 0.000
Pm026968 Prunus mume Pm026968 N 0.000
cassava23399.valid.m1 Manihot esculenta cassava23399.valid.m1 N 0.000
PK08522.1 Cannabis sativa PK08522.1 N 0.000