Eucgr.B00522 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.B00522 T257928_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B00522.1 MADS box 10 57
Eucgr.B00522.2 MADS box 10 57
Eucgr.B00522.3 MADS box 10 57

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29813.m001508 Ricinus communis 29813.m001508 I 0.717
30138.m004061 Ricinus communis 30138.m004061 I 0.875
AGL33 Populus trichocarpa POPTR_0018s08400 N 0.708
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.812
AGL65 Arabidopsis thaliana AT1G18750 D 0.792
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.812
AGL66 Arabidopsis thaliana AT1G77980 I 0.708
AGL66 Arabidopsis lyrata fgenesh2_kg.2__2091__AT1G77980.1 I 0.708
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.771
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.812
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.826
Bo6g121640 Brassica oleracea Bo6g121640 I 0.708
Bo8g068060 Brassica oleracea Bo8g068060 I 0.833
Bo8g104060 Brassica oleracea Bo8g104060 I 0.833
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.792
Bra015643 Brassica rapa Bra015643 I 0.708
Bra016544 Brassica rapa Bra016544 I 0.833
Bra025685 Brassica rapa Bra025685 I 0.792
Bra031049 Brassica rapa Bra031049 I 0.833
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.771
Cagra.0096s0037 Capsella grandiflora Cagra.0096s0037 I 0.708
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.771
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.771
Carubv10021590m.g Capsella rubella Carubv10021590m.g I 0.708
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.854
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.833
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.812
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.833
Cla010361 Citrullus lanatus Cla010361 I 0.729
Cla018884 Citrullus lanatus Cla018884 I 0.708
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.708
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.739
F775_13266 Aegilops tauschii F775_13266 I 0.750
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.812
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.792
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.875
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.875
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.812
GSMUA_Achr11G14240_001 Musa acuminata GSMUA_Achr11G14240_001 N 0.708
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.750
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.792
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.833
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.875
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.833
MDP0000147667 Malus domestica MDP0000147667 I 0.708
MDP0000193129 Malus domestica MDP0000193129 I 0.812
mgf000945m Mimulus guttatus mgf000945m I 0.729
mgf004425m Mimulus guttatus mgf004425m I 0.729
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.771
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.812
OBART11G21780 Oryza barthii OBART11G21780 N 0.812
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.792
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.792
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.826
OPUNC11G18320 Oryza punctata OPUNC11G18320 N 0.771
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.833
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.812
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.812
OS11G0658700 Oryza sativa OS11G0658700 N 0.812
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.792
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.792
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.812
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.833
PK21701.1 Cannabis sativa PK21701.1 I 0.833
Pm006479 Prunus mume Pm006479 I 0.708
Pm024895 Prunus mume Pm024895 I 0.771
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.771
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.708
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.833
Si028357m.g Setaria italica Si028357m.g N 0.771
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I 0.750
TCM_014051 Theobroma cacao TCM_014051 I 0.875
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.833
Thhalv10019686m.g Eutrema salsugineum Thhalv10019686m.g I 0.708
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.854
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.750
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.750
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.750
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.750