TF Information

Eucgr.B03514 *(Eucalyptus grandis)* MADS box
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00319 (SRF-TF)	IPR002100	Eucgr.B03514	T257934_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q9ATE3_PETHY M11008_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP28_01	0.750	0.750
MADS50 M10968_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS50_01	0.750	0.750
FLC M06990_2.00	Arabidopsis thaliana	WWDMYNDWWWWGGAAASW	WSTTTCCWWWWHNRKHWW	Dap-seq OMalley et al.(2016) AGL25_col_a	0.729	0.729
FLC M06991_2.00	Arabidopsis thaliana	WCYHAAAAWGGAAAS	STTTCCWTTTTDRGW	Dap-seq OMalley et al.(2016) AGL25_colamp_a	0.729	0.729
AGL6 M06986_2.00	Arabidopsis thaliana	TTWCCHAAAAWRGWAANWW	WWNTTWCYWTTTTDGGWAA	Dap-seq OMalley et al.(2016) AGL6_col_a	0.729	0.729
FLC M08147_2.00	Arabidopsis thaliana	NNWWDCYVAAAWWRGAAAVHH	DDBTTTCYWWTTTBRGHWWNN	ChIP-seq Mathelier et al.(2014) MA0558.1	0.729	0.729
SOC1 M08425_2.00	Arabidopsis thaliana	CCAAAAAWRGAAAND	HNTTTCYWTTTTTGG	ChIP-chip Mathelier et al.(2014) MA0554.1	0.729	0.729
SOC1 M10915_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AGL20_01	0.729	0.729
SEP2 M10916_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AGL4_01	0.729	0.729
Q9ATE8_PETHY M11011_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP21_01	0.729	0.729
Q40591_TOBAC M11002_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS1_03	0.729	0.729
O82699_MALDO M11022_2.00	Malus domestica	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS11_01	0.729	0.729
MAD17_ORYSJ M10961_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS17_01	0.729	0.729
MADS6 M10967_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS6_01	0.729	0.729
AGL16 M06987_2.00	Arabidopsis thaliana	TWCCHAAWDDGGWAA	TTWCCHHWTTDGGWA	Dap-seq OMalley et al.(2016) AGL16_col_a	0.708	0.708
AGL16 M06988_2.00	Arabidopsis thaliana	WDWNTTWCCHWAWWDGGAAAS	STTTCCHWWTWDGGWAANWHW	Dap-seq OMalley et al.(2016) AGL16_colamp_a	0.708	0.708
Q9LEH9_HORVU M10983_2.00	Hordeum vulgare	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BM9_01	0.708	0.708
Q9ATE9_PETHY M11012_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP20_01	0.708	0.708
Q9ATF1_PETHY M11013_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP9_01	0.708	0.708
Q9ST54_MALDO M11029_2.00	Malus domestica	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS3_04	0.708	0.708
O82697_MALDO M11020_2.00	Malus domestica	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS7_01	0.708	0.708
Solyc05g012020.2 M10986_2.00	Solanum lycopersicum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$RIN_01	0.708	0.708
Solyc05g012020.2 M10987_2.00	Solanum lycopersicum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$RIN_Q2_01	0.708	0.708
Solyc05g012020.2 M10988_2.00	Solanum lycopersicum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$RIN_Q2	0.708	0.708
For this family, TFs with SR scores > 0.700* will likely have a similar motif*