Eucgr.D00312 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.D00312 T257939_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D00312.1 MADS box 10 57

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.979
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.958
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.875
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.875
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.854
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.833
29693.m002039 Ricinus communis 29693.m002039 I 0.833
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.812
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.812
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.812
TCM_029518 Theobroma cacao TCM_029518 I 0.812
Pm030655 Prunus mume Pm030655 I 0.792
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.792
MDP0000274606 Malus domestica MDP0000274606 N 0.792
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.792
Lus10011787.g Linum usitatissimum Lus10011787.g N 0.771
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.771
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.771
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.771
MDP0000120467 Malus domestica MDP0000120467 N 0.771
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.771
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.771
Lus10016563.g Linum usitatissimum Lus10016563.g N 0.750
Ca_24185 Cicer arietinum Ca_24185 I 0.750
Ca_05023 Cicer arietinum Ca_05023 I 0.750
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.729
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.729
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.729
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.729
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.729
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.729
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.729
Cla019897 Citrullus lanatus Cla019897 N 0.729
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.729
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.729
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.729
AGL29 Arabidopsis thaliana AT2G34440 I 0.729
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.729
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.729
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.729
LjSGA_085239.1 Lotus japonicus LjSGA_085239.1 N 0.711
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.708
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.708
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.708
Bra021910 Brassica rapa Bra021910 I 0.708
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.708
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.708
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.708
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.708
Bo4g182590 Brassica oleracea Bo4g182590 I 0.708