Eucgr.E01734 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.E01734 T257948_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL80
M06994_2.00
Arabidopsis thaliana
TCACCA

TGGTGA
Dap-seq
OMalley et al.(2016)
FEM111_col_a
0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E01734.1 MADS box 10 56

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CaO19.11357 Candida albicans CaO19.11357 N 0.000
CD36_31730 Candida dubliniensis CD36_31730 N 0.000
G210_0568 Candida maltosa G210_0568 N 0.000
CORT_0D05060 Candida orthopsilosis CORT_0D05060 N 0.000
CPAG_04136 Candida parapsilosis CPAG_04136 N 0.000
e_gwh1.6.1.256.1 Pichia stipitis e_gwh1.6.1.256.1 N 0.000
PICST_47947 Scheffersomyces stipitis PICST_47947 N 0.000