Eucgr.I02596 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.I02596 T257993_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.729 0.729
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.I02596.1 MADS box 10 57

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

Invalid Input OrderBy

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action