evm.TU.contig_32899.1 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_32899.1 T258069_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL80
M06994_2.00
Arabidopsis thaliana
TCACCA

TGGTGA
Dap-seq
OMalley et al.(2016)
FEM111_col_a
0.706 0.706
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_32899.1 MADS box 1 35

Links

Other MADS box family TFs
Other Carica papaya TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aqu1.200547 Amphimedon queenslandica Aqu1.200547 N 0.000
Aqu1.200775 Amphimedon queenslandica Aqu1.200775 N 0.000
Aqu1.202374 Amphimedon queenslandica Aqu1.202374 N 0.000
Aqu1.202612 Amphimedon queenslandica Aqu1.202612 N 0.000
Aqu1.203266 Amphimedon queenslandica Aqu1.203266 N 0.000
Aqu1.203383 Amphimedon queenslandica Aqu1.203383 N 0.000
Aqu1.203693 Amphimedon queenslandica Aqu1.203693 N 0.000
Aqu1.204680 Amphimedon queenslandica Aqu1.204680 N 0.000
Aqu1.205713 Amphimedon queenslandica Aqu1.205713 N 0.000
Aqu1.209164 Amphimedon queenslandica Aqu1.209164 N 0.000
Aqu1.210475 Amphimedon queenslandica Aqu1.210475 N 0.000
Aqu1.215899 Amphimedon queenslandica Aqu1.215899 N 0.000
Aqu1.216992 Amphimedon queenslandica Aqu1.216992 N 0.000
Aqu1.217592 Amphimedon queenslandica Aqu1.217592 N 0.000
Aqu1.219278 Amphimedon queenslandica Aqu1.219278 N 0.000
Aqu1.220092 Amphimedon queenslandica Aqu1.220092 N 0.000
Aqu1.220383 Amphimedon queenslandica Aqu1.220383 N 0.000
Aqu1.225136 Amphimedon queenslandica Aqu1.225136 N 0.000