evm.TU.contig_35697 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_35697 T258088_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_35697.1 MADS box 22 49

Links

Other MADS box family TFs
Other Carica papaya TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_33091.2 Carica papaya evm.TU.contig_33091.2 N 0.893
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.893
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.857
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.857
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.857
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.857
Pm021071 Prunus mume Pm021071 N 0.821
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.821
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.821
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.821
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N 0.821
Bra038225 Brassica rapa Bra038225 N 0.786
Bra022434 Brassica rapa Bra022434 N 0.750
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.750
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.750
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.750
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.714
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.714
PGSC0003DMG400045423 Solanum tuberosum PGSC0003DMG400045423 N 0.700