evm.TU.contig_35868 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_35868 T258093_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_35868.1 MADS box 10 57

Links

Other MADS box family TFs
Other Carica papaya TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.909
evm.TU.contig_37084 Carica papaya evm.TU.contig_37084 I 0.826
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.818
evm.TU.supercontig_1750.1 Carica papaya evm.TU.supercontig_1750.1 I 0.818
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I 0.814
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.800
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I 0.786
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.778
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.778
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I 0.778
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.778
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.761
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.761
evm.TU.supercontig_34.40 Carica papaya evm.TU.supercontig_34.40 N 0.756
MDP0000925348 Malus domestica MDP0000925348 I 0.756
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.756
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N 0.756
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N 0.756
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.756
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I 0.750
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I 0.733
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.733
Pm004396 Prunus mume Pm004396 I 0.733
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.733
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.733
evm.TU.supercontig_185.6 Carica papaya evm.TU.supercontig_185.6 N 0.731
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I 0.727
mgf026186m Mimulus guttatus mgf026186m I 0.727
evm.TU.contig_40485 Carica papaya evm.TU.contig_40485 I 0.727
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.723
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.711
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.711
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.711
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.711
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.711
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.711
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.711
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N 0.711
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I 0.708
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.708
Ca_06495 Cicer arietinum Ca_06495 I 0.705