evm.TU.contig_40164 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_40164 T258123_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_40164.1 MADS box 10 55

Links

Other MADS box family TFs
Other Carica papaya TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000925348 Malus domestica MDP0000925348 I 0.822
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.800
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.800
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.800
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I 0.800
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.778
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.778
Pm004396 Prunus mume Pm004396 I 0.778
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.778
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.778
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.778
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.778
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.773
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.761
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.761
evm.TU.contig_25253.5 Carica papaya evm.TU.contig_25253.5 I 0.759
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.756
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.756
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.756
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.756
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.756
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.756
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.750
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.745
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I 0.735
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.733
evm.TU.contig_35762 Carica papaya evm.TU.contig_35762 N 0.733
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.733
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.733
MDP0000846004 Malus domestica MDP0000846004 I 0.729
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I 0.727
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I 0.727
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I 0.721
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.711
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.711
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.711
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.711
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.711
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.711
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.711
Ca_13275 Cicer arietinum Ca_13275 I 0.711
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.711
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I 0.711
evm.TU.supercontig_1256.1 Carica papaya evm.TU.supercontig_1256.1 N 0.711
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I 0.708
mgf026186m Mimulus guttatus mgf026186m I 0.705
30199.m000879 Ricinus communis 30199.m000879 I 0.702
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N 0.702
evm.TU.contig_46342 Carica papaya evm.TU.contig_46342 N 0.700
evm.TU.supercontig_30.163 Carica papaya evm.TU.supercontig_30.163 N 0.700