evm.TU.contig_44957 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_44957 T258134_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_44957.1 MADS box 10 55

Links

Other MADS box family TFs
Other Carica papaya TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF235 Homo sapiens ENSG00000159917 D 0.000
ENSMMUP00000016814 Macaca fascicularis ENSMMUP00000016814 I 0.000
ZNF235 Macaca mulatta ENSMMUG00000012801 I 0.000
ENSPANG00000006495 Papio anubis ENSPANG00000006495 I 0.000
ENSPPYG00000010086 Pongo abelii ENSPPYG00000010086 I 0.000
ZNF235 Pan troglodytes ENSPTRG00000011112 I 0.000
ENSSTOG00000013458 Ictidomys tridecemlineatus ENSSTOG00000013458 I 0.000
ZNF235 Tupaia belangeri ENSTBEG00000001345 I 0.000
ZNF235 Tursiops truncatus ENSTTRG00000006707 I 0.000
ZNF235 Myotis lucifugus ENSMLUG00000013784 I 0.000
ZNF235 Loxodonta africana ENSLAFG00000011186 I 0.000
ZNF235 Gorilla gorilla ENSGGOG00000008607 I 0.000
ZNF235 Equus caballus ENSECAG00000023724 I 0.000
ZNF235 Dasypus novemcinctus ENSDNOG00000042106 I 0.000
ZNF235 Canis familiaris ENSCAFG00000031857 I 0.000
ENSCSAG00000003323 Chlorocebus sabaeus ENSCSAG00000003323 I 0.000
ENSCJAG00000013266 Callithrix jacchus ENSCJAG00000013266 I 0.000
ZNF235 Vicugna pacos ENSVPAG00000000139 N 0.000
ZNF235 Sus scrofa ENSSSCG00000022434 N 0.000
ZNF235 Erinaceus europaeus ENSEEUG00000006864 N 0.000
ZNF235 Bos taurus ENSBTAG00000007714 N 0.000