evm.TU.supercontig_100.22 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_100.22 T258142_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_100.22 MADS box 14 37

Links

Other MADS box family TFs
Other Carica papaya TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.708
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.750
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I 0.708
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I 0.708
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.708
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.708
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.708
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.708
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.708
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.708
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.708
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.708
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.708
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.708
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.708
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.708
TCM_026842 Theobroma cacao TCM_026842 I 0.708
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.708
Ca_06495 Cicer arietinum Ca_06495 I 0.708
Pm003257 Prunus mume Pm003257 I 0.708
mgf026186m Mimulus guttatus mgf026186m I 0.708
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.750
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.708
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.708
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I 0.750
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.708
evm.TU.supercontig_1256.1 Carica papaya evm.TU.supercontig_1256.1 N 0.708
evm.TU.supercontig_358.1 Carica papaya evm.TU.supercontig_358.1 N 0.708
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N 0.708
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N 0.708
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N 0.708
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N 0.708