evm.TU.supercontig_900.5 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_900.5 T258292_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_900.5 MADS box 15 61

Links

Other MADS box family TFs
Other Carica papaya TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.702
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.702
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.723
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.723
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.723
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.708
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.729
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.750
evm.TU.supercontig_439.1 Carica papaya evm.TU.supercontig_439.1 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.750
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.708
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.750
evm.TU.supercontig_54.67 Carica papaya evm.TU.supercontig_54.67 N 0.729
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.729
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.729
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.729
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.723
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.729
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.750
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.729
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.708
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.708
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.750
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.750
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.723
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.702
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.contig_37489 Carica papaya evm.TU.contig_37489 N 0.700
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.766
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.787
evm.TU.contig_46312 Carica papaya evm.TU.contig_46312 N 0.708
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.723
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
Pm021071 Prunus mume Pm021071 N 0.702
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.702
TCM_006323 Theobroma cacao TCM_006323 N 0.723