gene02453-v1.0-hybrid (Fragaria vesca)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 gene02453-v1.0-hybrid T258297_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna02453.1-v1.0-hybrid MADS box 10 37

Links

Other MADS box family TFs
Other Fragaria vesca TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene05027-v1.0-hybrid Fragaria vesca gene05027-v1.0-hybrid I 0.750
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.750
TCM_024579 Theobroma cacao TCM_024579 I 0.750
GLYMA02G33040 Glycine max GLYMA02G33040 I 0.750
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.750
Ca_19854 Cicer arietinum Ca_19854 I 0.750
Cagra.0578s0070 Capsella grandiflora Cagra.0578s0070 I 0.714
Carubv10017886m.g Capsella rubella Carubv10017886m.g I 0.714
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.714
mgf022625m Mimulus guttatus mgf022625m N 0.714
Cla006973 Citrullus lanatus Cla006973 I 0.714
cassava3099.m1 Manihot esculenta cassava3099.m1 I 0.714
Cucsa.194800 Cucumis sativus Cucsa.194800 I 0.714
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.714
mgf024454m Mimulus guttatus mgf024454m N 0.714
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I 0.714
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.714
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.714
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.714
LjSGA_019451.1 Lotus japonicus LjSGA_019451.1 I 0.714
SapurV1A.0027s0860 Salix purpurea SapurV1A.0027s0860 I 0.714
MDP0000144516 Malus domestica MDP0000144516 I 0.714
gene12119-v1.0-hybrid Fragaria vesca gene12119-v1.0-hybrid I 0.714
gene29503-v1.0-hybrid Fragaria vesca gene29503-v1.0-hybrid I 0.714
Gorai.003G090800 Gossypium raimondii Gorai.003G090800 I 0.714
MDP0000135652 Malus domestica MDP0000135652 I 0.714
AGL15 Vitis vinifera VIT_13s0158g00100 I 0.714
Traes_1AS_24511D656 Triticum aestivum Traes_1AS_24511D656 I 0.714
Bo9g103660 Brassica oleracea Bo9g103660 I 0.714
Bo8g091790 Brassica oleracea Bo8g091790 I 0.714
Bra003278 Brassica rapa Bra003278 I 0.714
Bra007324 Brassica rapa Bra007324 I 0.714
Bra013891 Brassica rapa Bra013891 I 0.714
Bo6g072840 Brassica oleracea Bo6g072840 I 0.714
Bo4g111230 Brassica oleracea Bo4g111230 I 0.714
AGL18 Arabidopsis thaliana AT3G57390 I 0.714
AGL72 Arabidopsis thaliana AT5G51860 I 0.714
AGL71 Arabidopsis thaliana AT5G51870 I 0.714
Bo1g040180 Brassica oleracea Bo1g040180 I 0.714
Bra014628 Brassica rapa Bra014628 I 0.714
Bra028282 Brassica rapa Bra028282 I 0.714
AGL15 Populus trichocarpa POPTR_0009s06060 I 0.714
scaffold_801621.1 Arabidopsis lyrata scaffold_801621.1 I 0.714
Solyc10g080030.1 Solanum lycopersicum Solyc10g080030.1 I 0.714
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.714
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I 0.714
PGSC0003DMG400023729 Solanum tuberosum PGSC0003DMG400023729 I 0.714
Bra029155 Brassica rapa Bra029155 I 0.714
F775_18161 Aegilops tauschii F775_18161 I 0.714
MTR_1g041615 Medicago truncatula MTR_1g041615 I 0.714
MTR_1g053070 Medicago truncatula MTR_1g053070 I 0.714
Traes_1DS_A0312C264 Triticum aestivum Traes_1DS_A0312C264 I 0.714