gene07364-v1.0-hybrid (Fragaria vesca)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 gene07364-v1.0-hybrid T258313_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna07364.1-v1.0-hybrid MADS box 16 63

Links

Other MADS box family TFs
Other Fragaria vesca TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.708
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.729
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.708
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.750
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.750
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.771
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.729
MDP0000168914 Malus domestica MDP0000168914 N 0.708
MDP0000120467 Malus domestica MDP0000120467 N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.729
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.750
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.729
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.729
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.708
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N 0.714
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.729
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.708
PGSC0003DMG400039595 Solanum tuberosum PGSC0003DMG400039595 N 0.750
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
Bra038225 Brassica rapa Bra038225 N 0.729
Bo5g113750 Brassica oleracea Bo5g113750 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.729
Cla006571 Citrullus lanatus Cla006571 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.729
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
mgf024307m Mimulus guttatus mgf024307m N 0.708
mgf022625m Mimulus guttatus mgf022625m N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.729
Pm021071 Prunus mume Pm021071 N 0.708
Bo1g112460 Brassica oleracea Bo1g112460 N 0.750