gene07364-v1.0-hybrid (Fragaria vesca)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 gene07364-v1.0-hybrid T258313_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna07364.1-v1.0-hybrid MADS box 16 63

Links

Other MADS box family TFs
Other Fragaria vesca TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.729
Bo1g112460 Brassica oleracea Bo1g112460 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.708
Bra038225 Brassica rapa Bra038225 N 0.729
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.729
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.729
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.708
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.708
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.729
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.708
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.708
Cla006571 Citrullus lanatus Cla006571 N 0.708
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.771
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.750
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.750
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.729
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.750
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.729
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.708
MDP0000168914 Malus domestica MDP0000168914 N 0.708
MDP0000120467 Malus domestica MDP0000120467 N 0.708
mgf018529m Mimulus guttatus mgf018529m N 0.708
mgf024307m Mimulus guttatus mgf024307m N 0.708
mgf022625m Mimulus guttatus mgf022625m N 0.708
POPTR_0007s03410 Populus trichocarpa POPTR_0007s03410 N 0.714
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Pm021071 Prunus mume Pm021071 N 0.708
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.729
SapurV1A.0808s0160 Salix purpurea SapurV1A.0808s0160 N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.729
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.729
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.708
PGSC0003DMG400039595 Solanum tuberosum PGSC0003DMG400039595 N 0.750
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.729
TCM_006323 Theobroma cacao TCM_006323 N 0.729