Gorai.001G074200 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.001G074200 T258379_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.786 0.786
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G074200.1 MADS box 10 57
Gorai.001G074200.2 MADS box 17 44
Gorai.001G074200.3 MADS box 10 57
Gorai.001G074200.4 MADS box 17 44

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CANTEDRAFT_95736 Candida tenuis CANTEDRAFT_95736 N 0.000
CLUG_04044 Candida lusitaniae CLUG_04044 N 0.000
CLUG_04044 Clavispora lusitaniae CLUG_04044 N 0.000
CTRG_04782 Candida tropicalis CTRG_04782 N 0.000
estExt_fgenesh1_pg.C_chr_6.10290 Pichia stipitis estExt_fgenesh1_pg.C_chr_6.10290 N 0.000
G210_2856 Candida maltosa G210_2856 N 0.000
PGUG_04329 Candida guilliermondii PGUG_04329 N 0.000
PGUG_04329 Meyerozyma guilliermondii PGUG_04329 N 0.000
PICST_68074 Scheffersomyces stipitis PICST_68074 N 0.000