Gorai.003G105500 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.003G105500 T258392_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G105500.1 MADS box 10 56

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I 0.702
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.702
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.702
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I 0.750
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.851
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.702
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.702
mgf026186m Mimulus guttatus mgf026186m I 0.705
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.729
Ca_06495 Cicer arietinum Ca_06495 I 0.702
Bo2g104810 Brassica oleracea Bo2g104810 I 0.702
Bra018490 Brassica rapa Bra018490 I 0.702
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.702
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.702
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I 0.723
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.702
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.723
Gorai.004G054700 Gossypium raimondii Gorai.004G054700 N 0.702
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.723
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N 0.830
evm.TU.supercontig_265.3 Carica papaya evm.TU.supercontig_265.3 N 0.702
evm.TU.supercontig_22.66 Carica papaya evm.TU.supercontig_22.66 N 0.700
Gorai.004G229600 Gossypium raimondii Gorai.004G229600 N 0.787