Gorai.005G142100 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.005G142100 T258405_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G142100.1 MADS box 10 55

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.936
TCM_011687 Theobroma cacao TCM_011687 I 0.891
Pm006479 Prunus mume Pm006479 I 0.891
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.891
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.891
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.891
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.891
PK03147.1 Cannabis sativa PK03147.1 I 0.891
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.891
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.891
MDP0000773068 Malus domestica MDP0000773068 I 0.889
MDP0000919323 Malus domestica MDP0000919323 I 0.889
MDP0000146415 Malus domestica MDP0000146415 I 0.889
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.870
MDP0000147667 Malus domestica MDP0000147667 I 0.870
MDP0000146231 Malus domestica MDP0000146231 I 0.848
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.848
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.848
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.848
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.848
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.826
Ca_16376 Cicer arietinum Ca_16376 I 0.826
29813.m001508 Ricinus communis 29813.m001508 I 0.826
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.804
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.804
Ca_18082 Cicer arietinum Ca_18082 I 0.804
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.804
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.804
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.804
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.783
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.783
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.783
AGL30 Arabidopsis thaliana AT2G03060 I 0.783
Bo9g072860 Brassica oleracea Bo9g072860 N 0.783
Cla010361 Citrullus lanatus Cla010361 I 0.783
Bra017404 Brassica rapa Bra017404 I 0.761
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.761
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.761
Bo7g080890 Brassica oleracea Bo7g080890 I 0.761
Bra024792 Brassica rapa Bra024792 I 0.761
Lus10036761.g Linum usitatissimum Lus10036761.g N 0.761
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.761
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.761
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.761
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.761
AGL94 Arabidopsis lyrata Al_scaffold_0002_1615 N 0.745
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.739
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.739
Bra004393 Brassica rapa Bra004393 I 0.739
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.739
GLYMA02G12131 Glycine max GLYMA02G12131 N 0.739
Bo6g109050 Brassica oleracea Bo6g109050 I 0.739
AGL94 Arabidopsis thaliana AT1G69540 N 0.739