Gorai.010G165500 (Gossypium raimondii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Gorai.010G165500 T258475_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G165500.1 MADS box 10 57

Links

Other MADS box family TFs
Other Gossypium raimondii TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_029518 Theobroma cacao TCM_029518 I 0.917
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.896
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.896
29693.m002039 Ricinus communis 29693.m002039 I 0.896
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.854
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.854
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.854
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.833
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.833
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.812
Pm030655 Prunus mume Pm030655 I 0.812
Ca_05023 Cicer arietinum Ca_05023 I 0.812
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.812
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.812
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.812
Cla019897 Citrullus lanatus Cla019897 N 0.812
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.792
Lus10016563.g Linum usitatissimum Lus10016563.g N 0.792
MDP0000274606 Malus domestica MDP0000274606 N 0.792
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.792
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.792
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.792
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.792
Ca_24185 Cicer arietinum Ca_24185 I 0.792
Bra021910 Brassica rapa Bra021910 I 0.771
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.771
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.771
MDP0000120467 Malus domestica MDP0000120467 N 0.771
Bo4g182590 Brassica oleracea Bo4g182590 I 0.771
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.771
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.771
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.771
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.771
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.771
Lus10011787.g Linum usitatissimum Lus10011787.g N 0.750
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.750
AGL91 Arabidopsis thaliana AT3G66656 D 0.750
AGL29 Arabidopsis thaliana AT2G34440 I 0.750
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.750
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.750
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.750
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.750
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.750
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.750
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.750
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.750
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.750
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.732
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.729
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.729
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.729
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.729
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.729
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.729
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.729
TRIUR3_21732 Triticum urartu TRIUR3_21732 I 0.721
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.711
PDK_20s1551551g001 Phoenix dactylifera PDK_20s1551551g001 I 0.708
GSMUA_AchrUn_randomG20290_001 Musa acuminata GSMUA_AchrUn_randomG20290_001 I 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.708
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.708
Bra002480 Brassica rapa Bra002480 N 0.708
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.708
Traes_7DL_A773A64E2 Triticum aestivum Traes_7DL_A773A64E2 N 0.707