Lus10040832.g (Linum usitatissimum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Lus10040832.g T258632_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10040832 MADS box 10 57

Links

Other MADS box family TFs
Other Linum usitatissimum TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10016563.g Linum usitatissimum Lus10016563.g N 0.896
29693.m002039 Ricinus communis 29693.m002039 I 0.875
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.875
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.875
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.875
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.854
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.854
TCM_029518 Theobroma cacao TCM_029518 I 0.854
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.854
Lus10011787.g Linum usitatissimum Lus10011787.g N 0.854
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.854
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.833
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.833
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.833
MDP0000274606 Malus domestica MDP0000274606 N 0.833
Pm030655 Prunus mume Pm030655 I 0.833
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.812
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.771
Cla019897 Citrullus lanatus Cla019897 N 0.771
MDP0000120467 Malus domestica MDP0000120467 N 0.771
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.771
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.750
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.750
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.750
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.750
AGL29 Arabidopsis thaliana AT2G34440 I 0.750
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.750
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.750
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.729
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.729
Bo4g182590 Brassica oleracea Bo4g182590 I 0.729
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.729
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.729
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.729
Bra021910 Brassica rapa Bra021910 I 0.729
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.729
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.729
Ca_05023 Cicer arietinum Ca_05023 I 0.729
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.708
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.708
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.708
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.708
Ca_24185 Cicer arietinum Ca_24185 I 0.708
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.708