MDP0000186558 (Malus domestica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 MDP0000186558 T258674_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q84LI3_WHEAT
M10979_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TAVRT1_01 		0.729 0.729
O82128_WHEAT
M10965_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WAP1_01 		0.729 0.729
Q9ATE8_PETHY
M11011_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP21_01 		0.708 0.708
Q40591_TOBAC
M11002_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS1_03 		0.708 0.708
O82699_MALDO
M11022_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000186558 MADS box 10 57

Links

Other MADS box family TFs
Other Malus domestica TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000218227 Malus domestica MDP0000218227 I 1.000
PRUPE_ppa015338mg Prunus persica PRUPE_ppa015338mg I 0.917
gene01336-v1.0-hybrid Fragaria vesca gene01336-v1.0-hybrid I 0.896
TCM_008716 Theobroma cacao TCM_008716 I 0.812
MDP0000127771 Malus domestica MDP0000127771 N 0.792
MDP0000138447 Malus domestica MDP0000138447 N 0.771
Cla000705 Citrullus lanatus Cla000705 I 0.771
TCM_017242 Theobroma cacao TCM_017242 I 0.750
TRIUR3_21732 Triticum urartu TRIUR3_21732 I 0.744
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.733
Q84LI3_WHEAT Triticum aestivum Q84LI3_WHEAT D 0.729
Traes_5DS_866BAC69D Triticum aestivum Traes_5DS_866BAC69D I 0.729
Traes_5DL_9CC4EC839 Triticum aestivum Traes_5DL_9CC4EC839 I 0.729
cassava15798.m1 Manihot esculenta cassava15798.m1 I 0.729
PK28790.1 Cannabis sativa PK28790.1 I 0.729
Lus10041548.g Linum usitatissimum Lus10041548.g I 0.729
Lus10012545.g Linum usitatissimum Lus10012545.g I 0.729
O82128_WHEAT Triticum aestivum O82128_WHEAT D 0.729
Traes_5BL_89636D032 Triticum aestivum Traes_5BL_89636D032 I 0.729
MLOC_76418 Hordeum vulgare MLOC_76418 I 0.729
F775_32722 Aegilops tauschii F775_32722 I 0.729
LPERR02G25570 Leersia perrieri LPERR02G25570 I 0.729
Eucgr.K00198 Eucalyptus grandis Eucgr.K00198 I 0.721
Traes_7AS_F568FCBF1 Triticum aestivum Traes_7AS_F568FCBF1 I 0.717
Gorai.007G058200 Gossypium raimondii Gorai.007G058200 I 0.708
GSMUA_Achr3G30440_001 Musa acuminata GSMUA_Achr3G30440_001 I 0.708
GSMUA_Achr3G07310_001 Musa acuminata GSMUA_Achr3G07310_001 I 0.708
Lus10035029.g Linum usitatissimum Lus10035029.g N 0.708
BRADI1G08340 Brachypodium distachyon BRADI1G08340 I 0.708
mgf019667m Mimulus guttatus mgf019667m I 0.708
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I 0.708
Bostr.25542s0226 Boechera stricta Bostr.25542s0226 I 0.708
Eucgr.E01330 Eucalyptus grandis Eucgr.E01330 I 0.708
Eucgr.H04618 Eucalyptus grandis Eucgr.H04618 I 0.708
GSMUA_Achr10G18600_001 Musa acuminata GSMUA_Achr10G18600_001 I 0.708
Aquca_013_00477 Aquilegia coerulea Aquca_013_00477 I 0.708
GRMZM2G044408 Zea mays GRMZM2G044408 I 0.708
Thhalv10006419m.g Eutrema salsugineum Thhalv10006419m.g I 0.708
Pavir.J07457 Panicum virgatum Pavir.J07457 I 0.708
Thhalv10014716m.g Eutrema salsugineum Thhalv10014716m.g I 0.708
PK01421.1 Cannabis sativa PK01421.1 I 0.708
F775_23758 Aegilops tauschii F775_23758 I 0.708
PK27820.1 Cannabis sativa PK27820.1 I 0.708
Pavir.Ea01057 Panicum virgatum Pavir.Ea01057 I 0.708
Pavir.Ab02921 Panicum virgatum Pavir.Ab02921 I 0.708
MDP0000205637 Malus domestica MDP0000205637 I 0.708
MDP0000149676 Malus domestica MDP0000149676 I 0.708
BGIOSGA026939 Oryza indica BGIOSGA026939 I 0.708
MDP0000248130 Malus domestica MDP0000248130 I 0.708
O82699_MALDO Malus domestica O82699_MALDO D 0.708
MDP0000270062 Malus domestica MDP0000270062 I 0.708
Q9ATE8_PETHY Petunia x hybrida Q9ATE8_PETHY D 0.708
GSMUA_Achr6G00050_001 Musa acuminata GSMUA_Achr6G00050_001 I 0.708
ONIVA02G34790 Oryza nivara ONIVA02G34790 I 0.708
OMERI08G12880 Oryza meridionalis OMERI08G12880 I 0.708
ONIVA08G16700 Oryza nivara ONIVA08G16700 I 0.708
OPUNC02G00040 Oryza punctata OPUNC02G00040 I 0.708
OPUNC08G13690 Oryza punctata OPUNC08G13690 I 0.708
OPUNC02G29000 Oryza punctata OPUNC02G29000 I 0.708
OMERI02G30060 Oryza meridionalis OMERI02G30060 I 0.708
OLONG_011763 Oryza longistaminata OLONG_011763 I 0.708
OBART02G31280 Oryza barthii OBART02G31280 I 0.708
OB08G23110 Oryza brachyantha OB08G23110 I 0.708
OGLUM02G31980 Oryza glumaepatula OGLUM02G31980 I 0.708
OGLUM08G16360 Oryza glumaepatula OGLUM08G16360 I 0.708
OLONG_004860 Oryza longistaminata OLONG_004860 I 0.708
ORGLA02G0267800 Oryza glaberrima ORGLA02G0267800 I 0.708
ORUFI02G32980 Oryza rufipogon ORUFI02G32980 I 0.708
LPERR02G00370 Leersia perrieri LPERR02G00370 I 0.708
F775_00385 Aegilops tauschii F775_00385 I 0.708
GSMUA_Achr9G15540_001 Musa acuminata GSMUA_Achr9G15540_001 I 0.708
Traes_7DS_4DF7EB08F Triticum aestivum Traes_7DS_4DF7EB08F I 0.708
OB02G38310 Oryza brachyantha OB02G38310 I 0.708
GSMUA_Achr8G12280_001 Musa acuminata GSMUA_Achr8G12280_001 I 0.708
Q40591_TOBAC Nicotiana tabacum Q40591_TOBAC D 0.708
LPERR08G18330 Leersia perrieri LPERR08G18330 I 0.708
BRADI3G57017 Brachypodium distachyon BRADI3G57017 I 0.708
MADS57 Oryza sativa OS02G0731200 I 0.708
AMTR_s00001p00267050 Amborella trichopoda AMTR_s00001p00267050 I 0.708
Sb04g028960 Sorghum bicolor Sb04g028960 I 0.708
TCM_000931 Theobroma cacao TCM_000931 I 0.708
Si019880m.g Setaria italica Si019880m.g I 0.708
PK02524.1 Cannabis sativa PK02524.1 I 0.705