MDP0000315938 (Malus domestica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 MDP0000315938 T258744_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q8VWZ4_MALDO
M11026_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS13_01
1.000 1.000
AP3
M08146_2.00
Arabidopsis thaliana
WDCCMAAARWRGHAA

TTDCYWYTTTKGGHW
ChIP-seq
Mathelier et al.(2014)
MA0556.1
0.812 0.812
Q40513_TOBAC
M11001_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DEF_01
0.812 0.812
AP3
M10919_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSB_Q2
0.812 0.812
MADS2_PETHY
M10998_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_01
0.771 0.771
Q9AVU7_MALDO
M11027_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PI_01
0.750 0.750
MADS16
M10971_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS16_01
0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000315938 MADS box 10 57

Links

Other MADS box family TFs
Other Malus domestica TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000009606 Ailuropoda melanoleuca ENSAMEG00000009606 I 0.000
Alligator_sinensis_CCG016283.1 Alligator sinensis Alligator_sinensis_CCG016283.1 I 0.000
ENSAPLG00000003920 Anas platyrhynchos ENSAPLG00000003920 I 0.000
SNAI2 Anolis carolinensis ENSACAG00000012332 I 0.000
Afo_R005870 Aptenodytes forsteri Afo_R005870 I 0.000
ACEP13085 Atta cephalotes ACEP13085 I 0.000
BGIBMGA006230 Bombyx mori BGIBMGA006230 I 0.000
ENSP00000020945-D1 Bos grunniens ENSP00000020945-D1 I 0.000
SNAI2 Bos taurus ENSBTAG00000013227 I 0.000
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.000
Brh_R006038 Buceros rhinoceros Brh_R006038 I 0.000
SNAI2 Callithrix jacchus ENSCJAG00000013499 I 0.000
Aan_R012932 Calypte anna Aan_R012932 I 0.000
Cflo_07707--XP_393944.1_APIME Camponotus floridanus Cflo_07707--XP_393944.1_APIME I 0.000
SNAI2 Canis familiaris ENSCAFG00000006638 I 0.000
CapteG76255 Capitella teleta CapteG76255 I 0.000
ENSCPOG00000014827 Cavia porcellus ENSCPOG00000014827 I 0.000
ENSCSAG00000014787 Chlorocebus sabaeus ENSCSAG00000014787 I 0.000
SNAI2 Choloepus hoffmanni ENSCHOG00000007046 I 0.000
CLEC007039 Cimex lectularius CLEC007039 I 0.000
CGI_10027813 Crassostrea gigas CGI_10027813 I 0.000
KGM_17970 Danaus plexippus KGM_17970 I 0.000
SNAI2 Dasypus novemcinctus ENSDNOG00000035997 I 0.000
YQE_07640 Dendroctonus ponderosae YQE_07640 I 0.000
GF15382 Drosophila ananassae FBgn0092407 I 0.000
GF14525 Drosophila ananassae FBgn0091552 I 0.000
GG24207 Drosophila erecta FBgn0116339 I 0.000
GG25158 Drosophila erecta FBgn0117283 I 0.000
GH13754 Drosophila grimshawi FBgn0121230 I 0.000
GH13119 Drosophila grimshawi FBgn0120596 I 0.000
wor Drosophila melanogaster FBgn0001983 D 0.000
esg Drosophila melanogaster FBgn0001981 D 0.000
GI17894 Drosophila mojavensis FBgn0140635 I 0.000
GI22651 Drosophila mojavensis FBgn0145379 I 0.000
GL26425 Drosophila persimilis FBgn0164007 I 0.000
GL26594 Drosophila persimilis FBgn0164176 I 0.000
GA17994 Drosophila pseudoobscura FBgn0078003 I 0.000
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.000
GM14357 Drosophila sechellia FBgn0169282 I 0.000
GD21956 Drosophila simulans FBgn0193371 I 0.000
GJ23203 Drosophila virilis FBgn0210305 I 0.000
GJ17399 Drosophila virilis FBgn0204571 I 0.000
GK18133 Drosophila willistoni FBgn0220132 I 0.000
GK18253 Drosophila willistoni FBgn0220252 I 0.000
GE20968 Drosophila yakuba FBgn0238253 I 0.000
GE19402 Drosophila yakuba FBgn0236745 I 0.000
SNAI2 Equus caballus ENSECAG00000010120 I 0.000
SNAI2 Felis catus ENSFCAG00000015779 I 0.000
ENSFALG00000005762 Ficedula albicollis ENSFALG00000005762 I 0.000
ENSGALG00000015241 Gallus gallus ENSGALG00000015241 I 0.000
Gfo_R012649 Geospiza fortis Gfo_R012649 I 0.000
SNAI2 Gorilla gorilla ENSGGOG00000000959 I 0.000
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.000
HMEL002306 Heliconius melpomene HMEL002306 I 0.000
SNAI2 Homo sapiens ENSG00000019549 D 0.000
ENSSTOG00000028743 Ictidomys tridecemlineatus ENSSTOG00000028743 I 0.000
ENSLACG00000005413 Latimeria chalumnae ENSLACG00000005413 I 0.000
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.000
LotgiG114290 Lottia gigantea LotgiG114290 I 0.000
SNAI2 Loxodonta africana ENSLAFG00000009299 I 0.000
LCUP013268 Lucilia cuprina LCUP013268 I 0.000
LCUP006862 Lucilia cuprina LCUP006862 I 0.000
ENSP00000380034 Macaca fascicularis ENSP00000380034 I 0.000
SNAI2 Macaca mulatta ENSMMUG00000016195 I 0.000
ENSMEUG00000009510 Macropus eugenii ENSMEUG00000009510 I 0.000
SNAI2 Meleagris gallopavo ENSMGAG00000010813 I 0.000
MCINX001355 Melitaea cinxia MCINX001355 I 0.000
SNAI2 Microcebus murinus ENSMICG00000000335 I 0.000
SNAI2 Monodelphis domestica ENSMODG00000010173 I 0.000
MDOA006149 Musca domestica MDOA006149 I 0.000
MDOA014024 Musca domestica MDOA014024 I 0.000
ENSMPUG00000010793 Mustela putorius furo ENSMPUG00000010793 I 0.000
Snai2 Mus musculus ENSMUSG00000022676 D 0.000
Myotis_brandtii_Snai2_10018131 Myotis brandtii Myotis_brandtii_Snai2_10018131 I 0.000
SNAI2 Myotis lucifugus ENSMLUG00000001086 I 0.000
NV17743 Nasonia vitripennis NV17743 I 0.000
ENSNLEG00000013421 Nomascus leucogenys ENSNLEG00000013421 I 0.000
Ogr04681 Ophisaurus gracilis Ogr04681 I 0.000
SNAI2 Ornithorhynchus anatinus ENSOANG00000007267 I 0.000
SNAI2 Oryctolagus cuniculus ENSOCUG00000012254 I 0.000
SNAI2 Otolemur garnettii ENSOGAG00000010500 I 0.000
ENSOARG00000013030 Ovis aries ENSOARG00000013030 I 0.000
SNAI2 Pan troglodytes ENSPTRG00000020235 I 0.000
ENSPANG00000017540 Papio anubis ENSPANG00000017540 I 0.000
PHUM091060 Pediculus humanus PHUM091060 I 0.000
ENSPSIG00000016395 Pelodiscus sinensis ENSPSIG00000016395 I 0.000
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.000
Pvit_15376 Pogona vitticeps Pvit_15376 I 0.000
ENSPPYG00000018578 Pongo abelii ENSPPYG00000018578 I 0.000
SNAI2 Procavia capensis ENSPCAG00000001788 I 0.000
SNAI2 Pteropus vampyrus ENSPVAG00000009457 I 0.000
Snai2 Rattus norvegicus ENSRNOG00000047699 I 0.000
RPRC005707 Rhodnius prolixus RPRC005707 I 0.000
Sakowv30043351m.g Saccoglossus kowalevskii Sakowv30043351m.g I 0.000
ENSSHAG00000004205 Sarcophilus harrisii ENSSHAG00000004205 I 0.000
SINV14155 Solenopsis invicta SINV14155 I 0.000
SMAR001314 Strigamia maritima SMAR001314 I 0.000
SMAR001730 Strigamia maritima SMAR001730 I 0.000
ENSSSCG00000026570 Sus scrofa ENSSSCG00000026570 I 0.000
ENSSSCG00000024404 Sus scrofa ENSSSCG00000024404 I 0.000
SNAI2 Taeniopygia guttata ENSTGUG00000010914 I 0.000
tetur13g00760 Tetranychus urticae tetur13g00760 I 0.000
TC014474 Tribolium castaneum TC014474 I 0.000
Tal_R003673 Tyto alba Tal_R003673 I 0.000
snai2.S Xenopus laevis XB-GENE-865699 I 0.000
AAB34088 Xenopus laevis AAB34088 I 0.000
snai2.L Xenopus laevis XB-GENE-6255814 I 0.000
AAK54139 Xenopus laevis AAK54139 I 0.000
AAK54137 Xenopus laevis AAK54137 I 0.000
snai2 Xenopus tropicalis XB-GENE-487371 I 0.000
AAK54135 Xenopus tropicalis AAK54135 I 0.000
L798_10614 Zootermopsis nevadensis L798_10614 I 0.000