CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000434703
(
Malus domestica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
MDP0000434703
T258755_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL91
M10922_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G66656_01
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000434703
MADS box
15
62
KMANESNLQVTFSKRRSGLFKKASELCTLCGAEVGIIVFSPGRKVFSF
Links
Other
MADS box
family TFs
Other
Malus domestica
TFs
263 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034453
Oryza indica
BGIOSGA034453
N
0.000
LPERR11G10810
Leersia perrieri
LPERR11G10810
N
0.000
OB11G20720
Oryza brachyantha
OB11G20720
N
0.000
OBART11G03940
Oryza barthii
OBART11G03940
N
0.000
OGLUM11G03660
Oryza glumaepatula
OGLUM11G03660
N
0.000
OLONG_001369
Oryza longistaminata
OLONG_001369
N
0.000
OLONG_001596
Oryza longistaminata
OLONG_001596
N
0.000
OMERI11G03590
Oryza meridionalis
OMERI11G03590
N
0.000
OMERI11G11300
Oryza meridionalis
OMERI11G11300
N
0.000
ONIVA11G04050
Oryza nivara
ONIVA11G04050
N
0.000
OPUNC11G03660
Oryza punctata
OPUNC11G03660
N
0.000
OPUNC11G11410
Oryza punctata
OPUNC11G11410
N
0.000
ORUFI11G03870
Oryza rufipogon
ORUFI11G03870
N
0.000
OS11G0160700
Oryza sativa
OS11G0160700
N
0.000
Pavir.Bb00513
Panicum virgatum
Pavir.Bb00513
N
0.000
Si016246m.g
Setaria italica
Si016246m.g
N
0.000
Si028825m.g
Setaria italica
Si028825m.g
N
0.000
TRAES3BF135900030CFD_g
Triticum aestivum
TRAES3BF135900030CFD_g
N
0.000