CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000696333
(
Malus domestica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
MDP0000696333
T258770_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000696333
MADS box
18
65
RIENEEDLLVSFSKRRSGVYKKASEMITLCGGEVGIVVFSPSGKPFSY
Links
Other
MADS box
family TFs
Other
Malus domestica
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm030654
Prunus mume
Pm030654
N
0.812
29693.m002042
Ricinus communis
29693.m002042
N
0.812
PRUPE_ppa021886mg
Prunus persica
PRUPE_ppa021886mg
N
0.812
PRUPE_ppa022905mg
Prunus persica
PRUPE_ppa022905mg
N
0.792
Ciclev10006708m.g
Citrus clementina
Ciclev10006708m.g
N
0.729
Ciclev10007010m.g
Citrus clementina
Ciclev10007010m.g
N
0.729
Ciclev10007104m.g
Citrus clementina
Ciclev10007104m.g
N
0.729
Cucsa.047600
Cucumis sativus
Cucsa.047600
N
0.729
Cla009921
Citrullus lanatus
Cla009921
N
0.729
PRUPE_ppa024983mg
Prunus persica
PRUPE_ppa024983mg
N
0.729
Pm008734
Prunus mume
Pm008734
N
0.729
Eucgr.L01236
Eucalyptus grandis
Eucgr.L01236
N
0.708
Eucgr.E02872
Eucalyptus grandis
Eucgr.E02872
N
0.708
Ciclev10006958m.g
Citrus clementina
Ciclev10006958m.g
N
0.708
Ciclev10006503m.g
Citrus clementina
Ciclev10006503m.g
N
0.708
POPTR_0004s13590
Populus trichocarpa
POPTR_0004s13590
N
0.708