orange1.1g038327m.g (Citrus sinensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 orange1.1g038327m.g T258813_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g038327m MADS box 3 38

Links

Other MADS box family TFs
Other Citrus sinensis TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.806
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.778
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.778
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.778
Ciclev10006427m.g Citrus clementina Ciclev10006427m.g N 0.778
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.778
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.778
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.778
29693.m002041 Ricinus communis 29693.m002041 N 0.778
29693.m002042 Ricinus communis 29693.m002042 N 0.750
Eucgr.E02824 Eucalyptus grandis Eucgr.E02824 N 0.722
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.722
Eucgr.E02827 Eucalyptus grandis Eucgr.E02827 N 0.722
Eucgr.E02870 Eucalyptus grandis Eucgr.E02870 N 0.722
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.722
Eucgr.E02829 Eucalyptus grandis Eucgr.E02829 N 0.722
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.722
Pm008734 Prunus mume Pm008734 N 0.722
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.722
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.722
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.722
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.722
Cla009921 Citrullus lanatus Cla009921 N 0.722