Pavir.Ba03370 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.Ba03370 T258857_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba03370.1.p MADS box 17 64

Links

Other MADS box family TFs
Other Panicum virgatum TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo1g102270 Brassica oleracea Bo1g102270 I 0.000
Bo4g126940 Brassica oleracea Bo4g126940 I 0.000
Bo7g040830 Brassica oleracea Bo7g040830 I 0.000
Bra014923 Brassica rapa Bra014923 I 0.000
PK08705.1 Cannabis sativa PK08705.1 N 0.000
evm.TU.supercontig_44.78 Carica papaya evm.TU.supercontig_44.78 I 0.000
Ca_23174 Cicer arietinum Ca_23174 I 0.000
Cla021854 Citrullus lanatus Cla021854 I 0.000
Ciclev10005872m.g Citrus clementina Ciclev10005872m.g I 0.000
orange1.1g028060m.g Citrus sinensis orange1.1g028060m.g I 0.000
Cucsa.255290 Cucumis sativus Cucsa.255290 I 0.000
Eucgr.H00174 Eucalyptus grandis Eucgr.H00174 N 0.000
gene11436-v1.0-hybrid Fragaria vesca gene11436-v1.0-hybrid I 0.000
GLYMA20G22010 Glycine max GLYMA20G22010 I 0.000
GLYMA10G01010 Glycine max GLYMA10G01010 I 0.000
Lus10021199.g Linum usitatissimum Lus10021199.g N 0.000
Lus10041148.g Linum usitatissimum Lus10041148.g N 0.000
Lus10022186.g Linum usitatissimum Lus10022186.g I 0.000
Lus10021876.g Linum usitatissimum Lus10021876.g N 0.000
cassava627.valid.m1 Manihot esculenta cassava627.valid.m1 N 0.000
cassava35418.valid.m1 Manihot esculenta cassava35418.valid.m1 N 0.000
MTR_1g043430 Medicago truncatula MTR_1g043430 I 0.000
POPTR_0008s16560 Populus trichocarpa POPTR_0008s16560 N 0.000
POPTR_0010s08360 Populus trichocarpa POPTR_0010s08360 N 0.000
PRUPE_ppa011217mg Prunus persica PRUPE_ppa011217mg I 0.000
29603.m000513 Ricinus communis 29603.m000513 N 0.000
SapurV1A.0292s0060 Salix purpurea SapurV1A.0292s0060 N 0.000