Pavir.Bb00803 (Panicum virgatum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Pavir.Bb00803 T258862_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Bb00803.1.p MADS box 17 64

Links

Other MADS box family TFs
Other Panicum virgatum TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYRF Homo sapiens ENSG00000124920 D 0.000
Myrf Mus musculus ENSMUSG00000036098 D 0.000
myrf Danio rerio ENSDARG00000078676 D 0.000
ENSSTOG00000000529 Ictidomys tridecemlineatus ENSSTOG00000000529 I 0.000
MYRF Sus scrofa ENSSSCG00000013078 I 0.000
ENSSHAG00000002443 Sarcophilus harrisii ENSSHAG00000002443 I 0.000
Myrf Rattus norvegicus ENSRNOG00000028274 I 0.000
MYRF Pteropus vampyrus ENSPVAG00000012342 I 0.000
MYRF Pan troglodytes ENSPTRG00000003749 I 0.000
ENSPSIG00000015590 Pelodiscus sinensis ENSPSIG00000015590 I 0.000
ENSPPYG00000003180 Pongo abelii ENSPPYG00000003180 I 0.000
ENSPFOG00000011050 Poecilia formosa ENSPFOG00000011050 I 0.000
MYRF Procavia capensis ENSPCAG00000017079 I 0.000
ENSPANG00000013413 Papio anubis ENSPANG00000013413 I 0.000
MYRF Oryzias latipes ENSORLG00000006459 I 0.000
ENSONIG00000015523 Oreochromis niloticus ENSONIG00000015523 I 0.000
ENSTGUG00000006600 Taeniopygia guttata ENSTGUG00000006600 I 0.000
MYRF Tetraodon nigroviridis ENSTNIG00000016074 I 0.000
MYRF Takifugu rubripes ENSTRUG00000005197 I 0.000
myrf Xenopus tropicalis XB-GENE-1020968 I 0.000
Tal_R006175 Tyto alba Tal_R006175 I 0.000
Pvit_15884 Pogona vitticeps Pvit_15884 I 0.000
Myotis_brandtii_MRF_10005301 Myotis brandtii Myotis_brandtii_MRF_10005301 I 0.000
Gfo_R011942 Geospiza fortis Gfo_R011942 I 0.000
ENSP00000278836 Macaca fascicularis ENSP00000278836 I 0.000
ENSBTAP00000009187-D1 Bos grunniens ENSBTAP00000009187-D1 I 0.000
Cmyd_10008461 Chelonia mydas Cmyd_10008461 I 0.000
Brh_R007745 Buceros rhinoceros Brh_R007745 I 0.000
Alligator_sinensis_CCG012901.1 Alligator sinensis Alligator_sinensis_CCG012901.1 I 0.000
Afo_R010549 Aptenodytes forsteri Afo_R010549 I 0.000
Aan_R010750 Calypte anna Aan_R010750 I 0.000
SPU_000601 Strongylocentrotus purpuratus SPU_000601 I 0.000
myrf.L Xenopus laevis XB-GENE-1020972 I 0.000
MYRF Otolemur garnettii ENSOGAG00000010786 I 0.000
MYRF Oryctolagus cuniculus ENSOCUG00000003269 I 0.000
ENSOARG00000013482 Ovis aries ENSOARG00000013482 I 0.000
MYRF Felis catus ENSFCAG00000013683 I 0.000
ENSFALG00000011806 Ficedula albicollis ENSFALG00000011806 I 0.000
MYRF Equus caballus ENSECAG00000021799 I 0.000
Myrf Dipodomys ordii ENSDORG00000002029 I 0.000
MYRF Dasypus novemcinctus ENSDNOG00000005294 I 0.000
ENSCSAG00000006452 Chlorocebus sabaeus ENSCSAG00000006452 I 0.000
MYRF Cavia porcellus ENSCPOG00000013543 I 0.000
MYRF Callithrix jacchus ENSCJAG00000019218 I 0.000
MYRF Canis familiaris ENSCAFG00000016062 I 0.000
MYRF Bos taurus ENSBTAG00000006990 I 0.000
ENSAPLG00000006054 Anas platyrhynchos ENSAPLG00000006054 I 0.000
ENSAMXG00000015793 Astyanax mexicanus ENSAMXG00000015793 I 0.000
ENSAMEG00000016669 Ailuropoda melanoleuca ENSAMEG00000016669 I 0.000
MYRF Anolis carolinensis ENSACAG00000017691 I 0.000
myrf Gasterosteus aculeatus ENSGACG00000005416 I 0.000
ENSGALG00000020522 Gallus gallus ENSGALG00000020522 I 0.000
ENSMPUG00000014126 Mustela putorius furo ENSMPUG00000014126 I 0.000
MYRF Macaca mulatta ENSMMUG00000006655 I 0.000
ENSMMUG00000006501 Macaca mulatta ENSMMUG00000006501 I 0.000
MYRF Myotis lucifugus ENSMLUG00000010326 I 0.000
MYRF Meleagris gallopavo ENSMGAG00000004733 I 0.000
ENSMEUG00000004200 Macropus eugenii ENSMEUG00000004200 I 0.000
MYRF Ornithorhynchus anatinus ENSOANG00000003410 I 0.000
ENSLOCG00000000407 Lepisosteus oculatus ENSLOCG00000000407 I 0.000
ENSLACG00000016455 Latimeria chalumnae ENSLACG00000016455 I 0.000
ENSGMOG00000017696 Gadus morhua ENSGMOG00000017696 I 0.000
MYRF Gorilla gorilla ENSGGOG00000012529 I 0.000
ENSNLEG00000003069 Nomascus leucogenys ENSNLEG00000003069 I 0.000
Sakowv30007714m.g Saccoglossus kowalevskii Sakowv30007714m.g N 0.000
Ocbimv22003657m.g Octopus bimaculoides Ocbimv22003657m.g N 0.000
ENSCING00000025073 Ciona intestinalis ENSCING00000025073 N 0.000
ENSLOCG00000016212 Lepisosteus oculatus ENSLOCG00000016212 N 0.000
PHUM368740 Pediculus humanus PHUM368740 N 0.000