Q9AVU7_MALDO (Malus domestica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Q9AVU7_MALDO T258972_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9AVU7_MALDO
M11027_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PI_01
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MADS2_PETHY
M10998_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_01
0.917 0.917
FBP1_PETHY
M10996_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP1_01
0.833 0.833
PI
M08148_2.00
Arabidopsis thaliana
MCMAAARWRGAAAR

YTTTCYWYTTTKGK
ChIP-seq
Mathelier et al.(2014)
MA0559.1
0.750 0.750
Q8VWZ4_MALDO
M11026_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS13_01
0.750 0.750
AP3
M08146_2.00
Arabidopsis thaliana
WDCCMAAARWRGHAA

TTDCYWYTTTKGGHW
ChIP-seq
Mathelier et al.(2014)
MA0556.1
0.729 0.729
Q40513_TOBAC
M11001_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DEF_01
0.729 0.729
AP3
M10919_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSB_Q2
0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Q9AVU7_MALDO MADS box 10 57

Links

Other MADS box family TFs
Other Malus domestica TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29648.m001978 Ricinus communis 29648.m001978 I 0.917
29782.m000119 Ricinus communis 29782.m000119 I 0.729
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I 0.792
AMTR_s00066p00109320 Amborella trichopoda AMTR_s00066p00109320 I 0.708
AMTR_s00089p00081270 Amborella trichopoda AMTR_s00089p00081270 I 0.729
Aquca_006_00072 Aquilegia coerulea Aquca_006_00072 I 0.750
Aquca_007_00336 Aquilegia coerulea Aquca_007_00336 I 0.708
Aquca_014_00308 Aquilegia coerulea Aquca_014_00308 I 0.729
AP3 Arabidopsis thaliana AT3G54340 D 0.729
PI Arabidopsis thaliana AT5G20240 D 0.750
Bo2g020730 Brassica oleracea Bo2g020730 I 0.729
Bo3g010390 Brassica oleracea Bo3g010390 I 0.750
Bo3g014100 Brassica oleracea Bo3g014100 I 0.729
Bo4g120010 Brassica oleracea Bo4g120010 I 0.708
Bo8g083600 Brassica oleracea Bo8g083600 I 0.708
Bo9g152080 Brassica oleracea Bo9g152080 I 0.729
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I 0.729
Bostr.26527s0175 Boechera stricta Bostr.26527s0175 I 0.750
Bra002285 Brassica rapa Bra002285 I 0.729
Bra006549 Brassica rapa Bra006549 I 0.729
Bra007067 Brassica rapa Bra007067 I 0.708
Bra014822 Brassica rapa Bra014822 I 0.708
Bra020093 Brassica rapa Bra020093 I 0.729
BRADI1G35000 Brachypodium distachyon BRADI1G35000 I 0.708
Cagra.0179s0008 Capsella grandiflora Cagra.0179s0008 I 0.750
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I 0.729
Carubv10001962m.g Capsella rubella Carubv10001962m.g I 0.750
Carubv10018833m.g Capsella rubella Carubv10018833m.g I 0.729
cassava21176.m1 Manihot esculenta cassava21176.m1 I 0.750
cassava32003.m1 Manihot esculenta cassava32003.m1 I 0.896
cassava33649.m1 Manihot esculenta cassava33649.m1 I 0.771
cassava33721.m1 Manihot esculenta cassava33721.m1 I 0.896
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I 0.750
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I 0.750
cassava41235.m1 Manihot esculenta cassava41235.m1 I 0.750
Ca_01994 Cicer arietinum Ca_01994 I 0.729
Ca_03887 Cicer arietinum Ca_03887 I 0.812
Ca_04909 Cicer arietinum Ca_04909 I 0.750
Ca_13111 Cicer arietinum Ca_13111 I 0.854
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I 0.750
chr2.CM0249.370.nd Lotus japonicus chr2.CM0249.370.nd I 0.729
Ciclev10002410m.g Citrus clementina Ciclev10002410m.g I 0.729
Ciclev10002422m.g Citrus clementina Ciclev10002422m.g I 0.833
Ciclev10002471m.g Citrus clementina Ciclev10002471m.g I 0.896
Ciclev10026433m.g Citrus clementina Ciclev10026433m.g I 0.771
Cla021117 Citrullus lanatus Cla021117 I 0.750
Cla023547 Citrullus lanatus Cla023547 I 0.896
Cucsa.018420 Cucumis sativus Cucsa.018420 I 0.896
Cucsa.342790 Cucumis sativus Cucsa.342790 I 0.750
Eucgr.E01006 Eucalyptus grandis Eucgr.E01006 I 0.833
Eucgr.E01007 Eucalyptus grandis Eucgr.E01007 I 0.792
Eucgr.F01615 Eucalyptus grandis Eucgr.F01615 I 0.729
evm.TU.supercontig_26.316 Carica papaya evm.TU.supercontig_26.316 I 0.896
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I 0.750
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I 0.750
FBP1_PETHY Petunia x hybrida FBP1_PETHY D 0.833
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I 0.729
PI Arabidopsis lyrata fgenesh2_kg.6__2063__AT5G20240.1 I 0.771
gene11267-v1.0-hybrid Fragaria vesca gene11267-v1.0-hybrid I 0.917
gene11268-v1.0-hybrid Fragaria vesca gene11268-v1.0-hybrid I 0.938
gene14896-v1.0-hybrid Fragaria vesca gene14896-v1.0-hybrid I 0.729
GLYMA01G37470 Glycine max GLYMA01G37470 I 0.729
GLYMA04G02980 Glycine max GLYMA04G02980 I 0.729
GLYMA04G42420 Glycine max GLYMA04G42420 I 0.833
GLYMA06G02990 Glycine max GLYMA06G02990 I 0.750
GLYMA06G12380 Glycine max GLYMA06G12380 I 0.833
GLYMA11G07820 Glycine max GLYMA11G07820 I 0.729
GLYMA13G09660 Glycine max GLYMA13G09660 I 0.833
GLYMA14G24590 Glycine max GLYMA14G24590 I 0.833
Gorai.002G223100 Gossypium raimondii Gorai.002G223100 I 0.896
Gorai.003G011500 Gossypium raimondii Gorai.003G011500 I 0.729
Gorai.005G087600 Gossypium raimondii Gorai.005G087600 I 0.917
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I 0.771
GSMUA_Achr3G02280_001 Musa acuminata GSMUA_Achr3G02280_001 I 0.708
GSMUA_Achr5G01230_001 Musa acuminata GSMUA_Achr5G01230_001 I 0.771
GSMUA_Achr6G18670_001 Musa acuminata GSMUA_Achr6G18670_001 I 0.750
GSMUA_Achr9G20940_001 Musa acuminata GSMUA_Achr9G20940_001 I 0.729
GSMUA_Achr9G20950_001 Musa acuminata GSMUA_Achr9G20950_001 I 0.729
LjSGA_047687.2 Lotus japonicus LjSGA_047687.2 I 0.833
Lus10010630.g Linum usitatissimum Lus10010630.g I 0.729
Lus10029719.g Linum usitatissimum Lus10029719.g I 0.833
Lus10031960.g Linum usitatissimum Lus10031960.g I 0.729
Lus10033187.g Linum usitatissimum Lus10033187.g I 0.750
Lus10042749.g Linum usitatissimum Lus10042749.g I 0.833
MADS2_PETHY Petunia x hybrida MADS2_PETHY D 0.917
MDP0000133037 Malus domestica MDP0000133037 I 0.750
MDP0000184294 Malus domestica MDP0000184294 I 0.750
MDP0000224779 Malus domestica MDP0000224779 I 0.750
MDP0000315938 Malus domestica MDP0000315938 I 0.750
mgf003143m Mimulus guttatus mgf003143m I 0.833
mgf006158m Mimulus guttatus mgf006158m I 0.833
mgf008207m Mimulus guttatus mgf008207m I 0.833
mgf015533m Mimulus guttatus mgf015533m I 0.708
MTR_1g029670 Medicago truncatula MTR_1g029670 I 0.792
MTR_3g088615 Medicago truncatula MTR_3g088615 I 0.812
MTR_3g113030 Medicago truncatula MTR_3g113030 I 0.750
MTR_5g021270 Medicago truncatula MTR_5g021270 I 0.729
orange1.1g027470m.g Citrus sinensis orange1.1g027470m.g I 0.771
orange1.1g040046m.g Citrus sinensis orange1.1g040046m.g I 0.729
orange1.1g040096m.g Citrus sinensis orange1.1g040096m.g I 0.896
orange1.1g042044m.g Citrus sinensis orange1.1g042044m.g I 0.833
PGSC0003DMG400003541 Solanum tuberosum PGSC0003DMG400003541 I 0.771
PGSC0003DMG401007392 Solanum tuberosum PGSC0003DMG401007392 I 0.812
PK22420.1 Cannabis sativa PK22420.1 I 0.702
Pm004718 Prunus mume Pm004718 I 0.938
Pm006266 Prunus mume Pm006266 I 0.771
Pm026712 Prunus mume Pm026712 I 0.766
POPTR_0002s07920 Populus trichocarpa POPTR_0002s07920 I 0.854
POPTR_0005s12000 Populus trichocarpa POPTR_0005s12000 I 0.729
POPTR_0005s20480 Populus trichocarpa POPTR_0005s20480 I 0.833
POPTR_0007s13660 Populus trichocarpa POPTR_0007s13660 I 0.729
PRUPE_ppa010727mg Prunus persica PRUPE_ppa010727mg I 0.750
PRUPE_ppa012927mg Prunus persica PRUPE_ppa012927mg I 0.938
PRUPE_ppa022942mg Prunus persica PRUPE_ppa022942mg I 0.708
PRUPE_ppa026083mg Prunus persica PRUPE_ppa026083mg I 0.750
Q40513_TOBAC Nicotiana tabacum Q40513_TOBAC D 0.729
Q8VWZ4_MALDO Malus domestica Q8VWZ4_MALDO D 0.750
SapurV1A.0569s0080 Salix purpurea SapurV1A.0569s0080 I 0.729
SapurV1A.0829s0180 Salix purpurea SapurV1A.0829s0180 I 0.833
SapurV1A.2002s0050 Salix purpurea SapurV1A.2002s0050 I 0.729
Sb03g041860 Sorghum bicolor Sb03g041860 I 0.708
Solyc02g084630.2 Solanum lycopersicum Solyc02g084630.2 I 0.771
Solyc06g059970.2 Solanum lycopersicum Solyc06g059970.2 I 0.875
Solyc08g067230.2 Solanum lycopersicum Solyc08g067230.2 I 0.812
TCM_000266 Theobroma cacao TCM_000266 I 0.771
TCM_035212 Theobroma cacao TCM_035212 I 0.896
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I 0.708
Thhalv10014683m.g Eutrema salsugineum Thhalv10014683m.g I 0.750
Traes_7BL_7F4124E70 Triticum aestivum Traes_7BL_7F4124E70 I 0.760
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I 0.771
PI Vitis vinifera VIT_18s0001g01760 I 0.875
AP3 Vitis vinifera VIT_18s0001g13460 I 0.792