SapurV1A.0173s0310 (Salix purpurea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 SapurV1A.0173s0310 T259005_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FLC
M06990_2.00 		Arabidopsis thaliana
WWDMYNDWWWWGGAAASW
WSTTTCCWWWWHNRKHWW		 Dap-seq
OMalley et al.(2016)
AGL25_col_a 		0.714 0.714
FLC
M06991_2.00 		Arabidopsis thaliana
WCYHAAAAWGGAAAS
STTTCCWTTTTDRGW		 Dap-seq
OMalley et al.(2016)
AGL25_colamp_a 		0.714 0.714
AGL6
M06986_2.00 		Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA		 Dap-seq
OMalley et al.(2016)
AGL6_col_a 		0.714 0.714
FLC
M08147_2.00 		Arabidopsis thaliana
NNWWDCYVAAAWWRGAAAVHH
DDBTTTCYWWTTTBRGHWWNN		 ChIP-seq
Mathelier et al.(2014)
MA0558.1 		0.714 0.714
Q9LEH9_HORVU
M10983_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM9_01 		0.714 0.714
Q9ATF1_PETHY
M11013_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP9_01 		0.714 0.714
MAD17_ORYSJ
M10961_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS17_01 		0.714 0.714
Q9ST54_MALDO
M11029_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS3_04 		0.714 0.714
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.714 0.714
MADS6
M10967_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS6_01 		0.714 0.714
O82697_MALDO
M11020_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS7_01 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0173s0310.1.p MADS box 8 42

Links

Other MADS box family TFs
Other Salix purpurea TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0003s16820 Populus trichocarpa POPTR_0003s16820 I 0.886
POPTR_0003s16850 Populus trichocarpa POPTR_0003s16850 I 0.886
SapurV1A.0173s0350 Salix purpurea SapurV1A.0173s0350 I 0.800
SapurV1A.0833s0010 Salix purpurea SapurV1A.0833s0010 I 0.800
SapurV1A.0173s0340 Salix purpurea SapurV1A.0173s0340 I 0.800
POPTR_0003s16870 Populus trichocarpa POPTR_0003s16870 I 0.800
SapurV1A.1717s0010 Salix purpurea SapurV1A.1717s0010 I 0.800
POPTR_0003s16840 Populus trichocarpa POPTR_0003s16840 I 0.800
POPTR_0001s13660 Populus trichocarpa POPTR_0001s13660 I 0.800
SapurV1A.0658s0010 Salix purpurea SapurV1A.0658s0010 I 0.771
SapurV1A.0008s0740 Salix purpurea SapurV1A.0008s0740 I 0.771
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I 0.771
Eucgr.E01330 Eucalyptus grandis Eucgr.E01330 I 0.771
SapurV1A.1446s0020 Salix purpurea SapurV1A.1446s0020 I 0.771
SapurV1A.2188s0030 Salix purpurea SapurV1A.2188s0030 I 0.771
SapurV1A.4216s0020 Salix purpurea SapurV1A.4216s0020 I 0.771
SapurV1A.5743s0010 Salix purpurea SapurV1A.5743s0010 I 0.771
VIT_17s0000g05000 Vitis vinifera VIT_17s0000g05000 I 0.743
Sb06g026300 Sorghum bicolor Sb06g026300 I 0.743
Pavir.Gb01001 Panicum virgatum Pavir.Gb01001 I 0.743
Si010898m.g Setaria italica Si010898m.g I 0.743
Bra000392 Brassica rapa Bra000392 I 0.743
MDP0000135652 Malus domestica MDP0000135652 I 0.743
Lus10036543.g Linum usitatissimum Lus10036543.g I 0.743
PGSC0003DMG400001377 Solanum tuberosum PGSC0003DMG400001377 I 0.743
Eucgr.H04618 Eucalyptus grandis Eucgr.H04618 I 0.743
Solyc02g089200.2 Solanum lycopersicum Solyc02g089200.2 I 0.743
cassava3099.m1 Manihot esculenta cassava3099.m1 I 0.743
MTR_4g102530 Medicago truncatula MTR_4g102530 I 0.743
Thhalv10001597m.g Eutrema salsugineum Thhalv10001597m.g I 0.743
Bra004927 Brassica rapa Bra004927 I 0.743
cassava28648.m1 Manihot esculenta cassava28648.m1 I 0.743
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.743
PK14825.1 Cannabis sativa PK14825.1 I 0.743
GLYMA08G11110 Glycine max GLYMA08G11110 I 0.743
MDP0000144516 Malus domestica MDP0000144516 I 0.743
Bo4g024840 Brassica oleracea Bo4g024840 I 0.743
Cla006973 Citrullus lanatus Cla006973 I 0.714
cassava2637.m1 Manihot esculenta cassava2637.m1 I 0.714
cassava10843.m1 Manihot esculenta cassava10843.m1 I 0.714
Ca_16423 Cicer arietinum Ca_16423 I 0.714
cassava40221.m1 Manihot esculenta cassava40221.m1 I 0.714
30174.m008934 Ricinus communis 30174.m008934 I 0.714
Q9ATF1_PETHY Petunia x hybrida Q9ATF1_PETHY D 0.714
Pm025027 Prunus mume Pm025027 I 0.714
Pm030595 Prunus mume Pm030595 I 0.714
Pm019409 Prunus mume Pm019409 I 0.714
Traes_6AL_1F7DAC5FA Triticum aestivum Traes_6AL_1F7DAC5FA I 0.714
Si018160m.g Setaria italica Si018160m.g I 0.714
Cucsa.194800 Cucumis sativus Cucsa.194800 I 0.714
Si038257m.g Setaria italica Si038257m.g I 0.714
TCM_008716 Theobroma cacao TCM_008716 I 0.714
Solyc05g015730.1 Solanum lycopersicum Solyc05g015730.1 I 0.714
TCM_005458 Theobroma cacao TCM_005458 I 0.714
TCM_014337 Theobroma cacao TCM_014337 I 0.714
Traes_1DL_D5BBCA2D0 Triticum aestivum Traes_1DL_D5BBCA2D0 I 0.714
TRIUR3_28216 Triticum urartu TRIUR3_28216 I 0.714
VIT_15s0048g01270 Vitis vinifera VIT_15s0048g01270 I 0.714
TRIUR3_22246 Triticum urartu TRIUR3_22246 I 0.714
Traes_7DS_4AF5C695F Triticum aestivum Traes_7DS_4AF5C695F I 0.714
Traes_6BL_7C6B17284 Triticum aestivum Traes_6BL_7C6B17284 I 0.714
Traes_6DL_5B1D4DBF5 Triticum aestivum Traes_6DL_5B1D4DBF5 I 0.714
Ca_11363 Cicer arietinum Ca_11363 I 0.714
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I 0.714
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.714
Pavir.Aa00924 Panicum virgatum Pavir.Aa00924 I 0.714
Pavir.Ab02707 Panicum virgatum Pavir.Ab02707 I 0.714
orange1.1g037149m.g Citrus sinensis orange1.1g037149m.g I 0.714
orange1.1g026043m.g Citrus sinensis orange1.1g026043m.g I 0.714
MDP0000326390 Malus domestica MDP0000326390 I 0.714
MDP0000605482 Malus domestica MDP0000605482 I 0.714
O82697_MALDO Malus domestica O82697_MALDO D 0.714
Q9ST54_MALDO Malus domestica Q9ST54_MALDO D 0.714
SapurV1A.0045s0580 Salix purpurea SapurV1A.0045s0580 I 0.714
chr4.CM0126.630.nc Lotus japonicus chr4.CM0126.630.nc I 0.714
PDK_20s1538871g001 Phoenix dactylifera PDK_20s1538871g001 I 0.714
PDK_20s1674411g001 Phoenix dactylifera PDK_20s1674411g001 I 0.714
Thhalv10014726m.g Eutrema salsugineum Thhalv10014726m.g I 0.714
SapurV1A.0578s0130 Salix purpurea SapurV1A.0578s0130 I 0.714
SapurV1A.0282s0240 Salix purpurea SapurV1A.0282s0240 I 0.714
SapurV1A.0323s0170 Salix purpurea SapurV1A.0323s0170 I 0.714
SapurV1A.0578s0120 Salix purpurea SapurV1A.0578s0120 I 0.714
MDP0000289858 Malus domestica MDP0000289858 I 0.714
Lus10037039.g Linum usitatissimum Lus10037039.g I 0.714
Carubv10023910m.g Capsella rubella Carubv10023910m.g I 0.714
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.714
Ciclev10021911m.g Citrus clementina Ciclev10021911m.g I 0.714
Cagra.1085s0045 Capsella grandiflora Cagra.1085s0045 I 0.714
Cagra.0050s0135 Capsella grandiflora Cagra.0050s0135 I 0.714
mgf007278m Mimulus guttatus mgf007278m I 0.714
Bostr.18351s0063 Boechera stricta Bostr.18351s0063 I 0.714
Bostr.25993s0209 Boechera stricta Bostr.25993s0209 I 0.714
Ciclev10032572m.g Citrus clementina Ciclev10032572m.g I 0.714
Eucgr.B03514 Eucalyptus grandis Eucgr.B03514 I 0.714
Lus10004638.g Linum usitatissimum Lus10004638.g I 0.714
Lus10020477.g Linum usitatissimum Lus10020477.g I 0.714
Lus10026678.g Linum usitatissimum Lus10026678.g I 0.714
Gorai.007G093700 Gossypium raimondii Gorai.007G093700 I 0.714
Gorai.006G268400 Gossypium raimondii Gorai.006G268400 I 0.714
evm.TU.supercontig_414.3 Carica papaya evm.TU.supercontig_414.3 I 0.714
gene19428-v1.0-hybrid Fragaria vesca gene19428-v1.0-hybrid I 0.714
mgf001713m Mimulus guttatus mgf001713m I 0.714
POPTR_0014s07020 Populus trichocarpa POPTR_0014s07020 I 0.714
GSMUA_Achr1G24070_001 Musa acuminata GSMUA_Achr1G24070_001 I 0.714
GSMUA_Achr2G10250_001 Musa acuminata GSMUA_Achr2G10250_001 I 0.714
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I 0.714
GSMUA_Achr4G30120_001 Musa acuminata GSMUA_Achr4G30120_001 I 0.714
GSMUA_Achr11G19540_001 Musa acuminata GSMUA_Achr11G19540_001 I 0.714
GSMUA_Achr11G02790_001 Musa acuminata GSMUA_Achr11G02790_001 I 0.714
GRMZM2G097059 Zea mays GRMZM2G097059 I 0.714
GRMZM2G160565 Zea mays GRMZM2G160565 I 0.714
GRMZM2G171365 Zea mays GRMZM2G171365 I 0.714
GSMUA_Achr10G06580_001 Musa acuminata GSMUA_Achr10G06580_001 I 0.714
GSMUA_Achr8G12280_001 Musa acuminata GSMUA_Achr8G12280_001 I 0.714
GSMUA_Achr9G01370_001 Musa acuminata GSMUA_Achr9G01370_001 I 0.714
MLOC_56472 Hordeum vulgare MLOC_56472 I 0.714
MTR_3g084980 Medicago truncatula MTR_3g084980 I 0.714
MTR_8g033270 Medicago truncatula MTR_8g033270 I 0.714
OB02G35340 Oryza brachyantha OB02G35340 I 0.714
MLOC_52944 Hordeum vulgare MLOC_52944 I 0.714
MAD17_ORYSJ Oryza sativa MAD17_ORYSJ D 0.714
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I 0.714
LPERR02G22830 Leersia perrieri LPERR02G22830 I 0.714
LPERR04G18560 Leersia perrieri LPERR04G18560 I 0.714
GRMZM2G026223 Zea mays GRMZM2G026223 I 0.714
GLYMA07G08890 Glycine max GLYMA07G08890 I 0.714
Bo4g149800 Brassica oleracea Bo4g149800 I 0.714
Bo9g173370 Brassica oleracea Bo9g173370 I 0.714
Bra006051 Brassica rapa Bra006051 I 0.714
Bra009055 Brassica rapa Bra009055 I 0.714
BGIOSGA029053 Oryza indica BGIOSGA029053 I 0.714
BGIOSGA016980 Oryza indica BGIOSGA016980 I 0.714
AGL6 Arabidopsis thaliana AT2G45650 D 0.714
FLC Arabidopsis thaliana AT5G10140 D 0.714
BGIOSGA008820 Oryza indica BGIOSGA008820 I 0.714
Bra025126 Brassica rapa Bra025126 I 0.714
Bra028599 Brassica rapa Bra028599 I 0.714
AGL6 Arabidopsis lyrata fgenesh2_kg.4__2761__AT2G45650.1 I 0.714
GLYMA02G33040 Glycine max GLYMA02G33040 I 0.714
GLYMA03G02191 Glycine max GLYMA03G02191 I 0.714
GLYMA03G02210 Glycine max GLYMA03G02210 I 0.714
F775_31247 Aegilops tauschii F775_31247 I 0.714
F775_29383 Aegilops tauschii F775_29383 I 0.714
Bra030228 Brassica rapa Bra030228 I 0.714
BRADI3G41260 Brachypodium distachyon BRADI3G41260 I 0.714
BRADI3G51800 Brachypodium distachyon BRADI3G51800 I 0.714
OB03G11760 Oryza brachyantha OB03G11760 I 0.714
OB04G29660 Oryza brachyantha OB04G29660 I 0.714
ORUFI02G29550 Oryza rufipogon ORUFI02G29550 I 0.714
ORUFI03G01510 Oryza rufipogon ORUFI03G01510 I 0.714
ORUFI04G24470 Oryza rufipogon ORUFI04G24470 I 0.714
ORUFI08G24040 Oryza rufipogon ORUFI08G24040 I 0.714
ORGLA08G0229900 Oryza glaberrima ORGLA08G0229900 I 0.714
ORGLA08G0137000 Oryza glaberrima ORGLA08G0137000 I 0.714
OPUNC04G20380 Oryza punctata OPUNC04G20380 I 0.714
ORGLA02G0240800 Oryza glaberrima ORGLA02G0240800 I 0.714
ORGLA03G0015400 Oryza glaberrima ORGLA03G0015400 I 0.714
ORGLA04G0197900 Oryza glaberrima ORGLA04G0197900 I 0.714
MADS6 Oryza sativa OS02G0682200 D 0.714
MADS50 Oryza sativa OS03G0122600 D 0.714
PRUPE_ppa022942mg Prunus persica PRUPE_ppa022942mg I 0.714
PRUPE_ppa1027139mg Prunus persica PRUPE_ppa1027139mg I 0.714
Q9LEH9_HORVU Hordeum vulgare Q9LEH9_HORVU D 0.714
Sb04g031750 Sorghum bicolor Sb04g031750 I 0.714
PRUPE_ppa010391mg Prunus persica PRUPE_ppa010391mg I 0.714
AMTR_s00109p00015260 Amborella trichopoda AMTR_s00109p00015260 I 0.714
OS04G0580700 Oryza sativa OS04G0580700 I 0.714
OS08G0531900 Oryza sativa OS08G0531900 I 0.714
POPTR_0001s08510 Populus trichocarpa POPTR_0001s08510 I 0.714
OPUNC03G01630 Oryza punctata OPUNC03G01630 I 0.714
OPUNC02G25740 Oryza punctata OPUNC02G25740 I 0.714
OBART08G21560 Oryza barthii OBART08G21560 I 0.714
OGLUM02G28590 Oryza glumaepatula OGLUM02G28590 I 0.714
OGLUM03G01750 Oryza glumaepatula OGLUM03G01750 I 0.714
OGLUM04G22680 Oryza glumaepatula OGLUM04G22680 I 0.714
OBART08G15610 Oryza barthii OBART08G15610 I 0.714
OBART04G22790 Oryza barthii OBART04G22790 I 0.714
OB07G27140 Oryza brachyantha OB07G27140 I 0.714
OBART02G28030 Oryza barthii OBART02G28030 I 0.714
OBART03G01800 Oryza barthii OBART03G01800 I 0.714
OGLUM08G22840 Oryza glumaepatula OGLUM08G22840 I 0.714
OLONG_003266 Oryza longistaminata OLONG_003266 I 0.714
ONIVA02G31130 Oryza nivara ONIVA02G31130 I 0.714
ONIVA03G01420 Oryza nivara ONIVA03G01420 I 0.714
ONIVA04G21940 Oryza nivara ONIVA04G21940 I 0.714
ONIVA08G24570 Oryza nivara ONIVA08G24570 I 0.714
OMERI06G13650 Oryza meridionalis OMERI06G13650 I 0.714
OMERI04G19060 Oryza meridionalis OMERI04G19060 I 0.714
OLONG_010918 Oryza longistaminata OLONG_010918 I 0.714
OMERI02G27210 Oryza meridionalis OMERI02G27210 I 0.714
OMERI03G01730 Oryza meridionalis OMERI03G01730 I 0.714
FLC Arabidopsis lyrata scaffold_601028.1 I 0.714